Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cstf1Q99LC2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cstf1Q99LC2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cstf1Q99LC2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cstf1Q99LC2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Cstf1Q99LC2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cstf1Q99LC2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cstf1Q99LC2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cstf1Q99LC2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.73■□□□□ 0.75
Cstf1Q99LC2 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.73■□□□□ 0.75
Cstf1Q99LC2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cstf1Q99LC2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Cstf1Q99LC2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cstf1Q99LC2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cstf1Q99LC2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cstf1Q99LC2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cstf1Q99LC2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cstf1Q99LC2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cstf1Q99LC2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cstf1Q99LC2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cstf1Q99LC2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.72■□□□□ 0.75
Cstf1Q99LC2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cstf1Q99LC2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cstf1Q99LC2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.72■□□□□ 0.75
Cstf1Q99LC2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cstf1Q99LC2 Gm22325-201ENSMUST00000158904 308 ntBASIC19.72■□□□□ 0.75
Cstf1Q99LC2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cstf1Q99LC2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.72■□□□□ 0.75
Cstf1Q99LC2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cstf1Q99LC2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cstf1Q99LC2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cstf1Q99LC2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.71■□□□□ 0.75
Cstf1Q99LC2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf1Q99LC2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf1Q99LC2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cstf1Q99LC2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf1Q99LC2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf1Q99LC2 Gm8520-201ENSMUST00000186517 868 ntBASIC19.71■□□□□ 0.75
Cstf1Q99LC2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.71■□□□□ 0.75
Cstf1Q99LC2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf1Q99LC2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf1Q99LC2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf1Q99LC2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cstf1Q99LC2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Cstf1Q99LC2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.7■□□□□ 0.74
Cstf1Q99LC2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.7■□□□□ 0.74
Cstf1Q99LC2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cstf1Q99LC2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cstf1Q99LC2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cstf1Q99LC2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cstf1Q99LC2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cstf1Q99LC2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cstf1Q99LC2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.69■□□□□ 0.74
Cstf1Q99LC2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.69■□□□□ 0.74
Cstf1Q99LC2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cstf1Q99LC2 Gm27801-201ENSMUST00000184174 223 ntBASIC19.69■□□□□ 0.74
Cstf1Q99LC2 Mir7071-201ENSMUST00000184847 69 ntBASIC19.69■□□□□ 0.74
Cstf1Q99LC2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cstf1Q99LC2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cstf1Q99LC2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cstf1Q99LC2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cstf1Q99LC2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cstf1Q99LC2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf1Q99LC2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf1Q99LC2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf1Q99LC2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.68■□□□□ 0.74
Cstf1Q99LC2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cstf1Q99LC2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf1Q99LC2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf1Q99LC2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf1Q99LC2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf1Q99LC2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf1Q99LC2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf1Q99LC2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf1Q99LC2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf1Q99LC2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Cstf1Q99LC2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.67■□□□□ 0.74
Cstf1Q99LC2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf1Q99LC2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf1Q99LC2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf1Q99LC2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf1Q99LC2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf1Q99LC2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf1Q99LC2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cstf1Q99LC2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cstf1Q99LC2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cstf1Q99LC2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cstf1Q99LC2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
Cstf1Q99LC2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cstf1Q99LC2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cstf1Q99LC2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cstf1Q99LC2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cstf1Q99LC2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cstf1Q99LC2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cstf1Q99LC2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.66■□□□□ 0.74
Cstf1Q99LC2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cstf1Q99LC2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf1Q99LC2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Cstf1Q99LC2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf1Q99LC2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms