Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdk9Q99J95 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cdk9Q99J95 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cdk9Q99J95 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdk9Q99J95 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cdk9Q99J95 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdk9Q99J95 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cdk9Q99J95 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cdk9Q99J95 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdk9Q99J95 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
Cdk9Q99J95 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdk9Q99J95 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cdk9Q99J95 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdk9Q99J95 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cdk9Q99J95 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Cdk9Q99J95 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdk9Q99J95 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.75■□□□□ 0.75
Cdk9Q99J95 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdk9Q99J95 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdk9Q99J95 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Cdk9Q99J95 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdk9Q99J95 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdk9Q99J95 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Cdk9Q99J95 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk9Q99J95 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.74■□□□□ 0.75
Cdk9Q99J95 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Cdk9Q99J95 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Cdk9Q99J95 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.74■□□□□ 0.75
Cdk9Q99J95 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.74■□□□□ 0.75
Cdk9Q99J95 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk9Q99J95 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk9Q99J95 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk9Q99J95 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk9Q99J95 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk9Q99J95 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cdk9Q99J95 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk9Q99J95 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk9Q99J95 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Cdk9Q99J95 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk9Q99J95 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk9Q99J95 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cdk9Q99J95 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk9Q99J95 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk9Q99J95 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk9Q99J95 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk9Q99J95 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.73■□□□□ 0.75
Cdk9Q99J95 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk9Q99J95 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk9Q99J95 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk9Q99J95 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk9Q99J95 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk9Q99J95 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cdk9Q99J95 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.72■□□□□ 0.75
Cdk9Q99J95 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk9Q99J95 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk9Q99J95 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.72■□□□□ 0.75
Cdk9Q99J95 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk9Q99J95 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Cdk9Q99J95 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk9Q99J95 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cdk9Q99J95 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.72■□□□□ 0.75
Cdk9Q99J95 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk9Q99J95 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk9Q99J95 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk9Q99J95 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Cdk9Q99J95 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk9Q99J95 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk9Q99J95 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk9Q99J95 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk9Q99J95 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk9Q99J95 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Cdk9Q99J95 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk9Q99J95 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.71■□□□□ 0.75
Cdk9Q99J95 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cdk9Q99J95 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cdk9Q99J95 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Cdk9Q99J95 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk9Q99J95 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk9Q99J95 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk9Q99J95 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdk9Q99J95 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdk9Q99J95 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdk9Q99J95 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Cdk9Q99J95 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Cdk9Q99J95 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cdk9Q99J95 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdk9Q99J95 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdk9Q99J95 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.7■□□□□ 0.74
Cdk9Q99J95 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdk9Q99J95 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdk9Q99J95 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
Cdk9Q99J95 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cdk9Q99J95 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cdk9Q99J95 Gm45444-201ENSMUST00000211394 898 ntBASIC19.69■□□□□ 0.74
Cdk9Q99J95 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cdk9Q99J95 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdk9Q99J95 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdk9Q99J95 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cdk9Q99J95 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdk9Q99J95 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms