Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Thumpd1Q99J36 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Thumpd1Q99J36 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Thumpd1Q99J36 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.56■□□□□ 0.4
Thumpd1Q99J36 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Thumpd1Q99J36 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.56■□□□□ 0.4
Thumpd1Q99J36 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Thumpd1Q99J36 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Thumpd1Q99J36 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.56■□□□□ 0.4
Thumpd1Q99J36 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.56■□□□□ 0.4
Thumpd1Q99J36 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Thumpd1Q99J36 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Thumpd1Q99J36 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Thumpd1Q99J36 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Thumpd1Q99J36 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Thumpd1Q99J36 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Thumpd1Q99J36 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Thumpd1Q99J36 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Thumpd1Q99J36 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Thumpd1Q99J36 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Thumpd1Q99J36 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Thumpd1Q99J36 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Thumpd1Q99J36 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Thumpd1Q99J36 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.55■□□□□ 0.4
Thumpd1Q99J36 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Thumpd1Q99J36 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Thumpd1Q99J36 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Thumpd1Q99J36 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Thumpd1Q99J36 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.54■□□□□ 0.4
Thumpd1Q99J36 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Thumpd1Q99J36 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Thumpd1Q99J36 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Thumpd1Q99J36 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Thumpd1Q99J36 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Thumpd1Q99J36 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Thumpd1Q99J36 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Thumpd1Q99J36 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Thumpd1Q99J36 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Thumpd1Q99J36 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Thumpd1Q99J36 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.53■□□□□ 0.4
Thumpd1Q99J36 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.53■□□□□ 0.4
Thumpd1Q99J36 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.53■□□□□ 0.4
Thumpd1Q99J36 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.53■□□□□ 0.4
Thumpd1Q99J36 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Thumpd1Q99J36 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Thumpd1Q99J36 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Thumpd1Q99J36 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Thumpd1Q99J36 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Thumpd1Q99J36 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Thumpd1Q99J36 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Thumpd1Q99J36 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Thumpd1Q99J36 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Thumpd1Q99J36 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Thumpd1Q99J36 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Thumpd1Q99J36 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Thumpd1Q99J36 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Thumpd1Q99J36 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Thumpd1Q99J36 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Thumpd1Q99J36 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Thumpd1Q99J36 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd1Q99J36 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd1Q99J36 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd1Q99J36 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd1Q99J36 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.51■□□□□ 0.39
Thumpd1Q99J36 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd1Q99J36 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd1Q99J36 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd1Q99J36 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd1Q99J36 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Thumpd1Q99J36 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Thumpd1Q99J36 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Thumpd1Q99J36 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Thumpd1Q99J36 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Thumpd1Q99J36 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Thumpd1Q99J36 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Thumpd1Q99J36 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.5■□□□□ 0.39
Thumpd1Q99J36 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Thumpd1Q99J36 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Thumpd1Q99J36 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Thumpd1Q99J36 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Thumpd1Q99J36 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Thumpd1Q99J36 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Thumpd1Q99J36 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Thumpd1Q99J36 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Thumpd1Q99J36 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Thumpd1Q99J36 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Thumpd1Q99J36 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Thumpd1Q99J36 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Thumpd1Q99J36 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Thumpd1Q99J36 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Thumpd1Q99J36 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Thumpd1Q99J36 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd1Q99J36 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd1Q99J36 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd1Q99J36 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Thumpd1Q99J36 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd1Q99J36 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.48■□□□□ 0.39
Thumpd1Q99J36 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Thumpd1Q99J36 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.48■□□□□ 0.39
Thumpd1Q99J36 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms