Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha1Q91Y21 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha1Q91Y21 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha1Q91Y21 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha1Q91Y21 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha1Q91Y21 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.62■□□□□ 0.89
Pcdha1Q91Y21 Gm40848-201ENSMUST00000221998 324 ntBASIC20.62■□□□□ 0.89
Pcdha1Q91Y21 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Pcdha1Q91Y21 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha1Q91Y21 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha1Q91Y21 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.62■□□□□ 0.89
Pcdha1Q91Y21 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha1Q91Y21 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha1Q91Y21 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha1Q91Y21 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha1Q91Y21 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha1Q91Y21 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha1Q91Y21 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha1Q91Y21 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.61■□□□□ 0.89
Pcdha1Q91Y21 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha1Q91Y21 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Pcdha1Q91Y21 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha1Q91Y21 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha1Q91Y21 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha1Q91Y21 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha1Q91Y21 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Pcdha1Q91Y21 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha1Q91Y21 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.6■□□□□ 0.89
Pcdha1Q91Y21 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha1Q91Y21 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdha1Q91Y21 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.6■□□□□ 0.89
Pcdha1Q91Y21 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha1Q91Y21 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pcdha1Q91Y21 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha1Q91Y21 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha1Q91Y21 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha1Q91Y21 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha1Q91Y21 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha1Q91Y21 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pcdha1Q91Y21 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha1Q91Y21 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha1Q91Y21 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha1Q91Y21 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pcdha1Q91Y21 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Pcdha1Q91Y21 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha1Q91Y21 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha1Q91Y21 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.59■□□□□ 0.89
Pcdha1Q91Y21 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha1Q91Y21 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha1Q91Y21 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha1Q91Y21 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha1Q91Y21 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha1Q91Y21 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha1Q91Y21 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha1Q91Y21 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.58■□□□□ 0.89
Pcdha1Q91Y21 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha1Q91Y21 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.58■□□□□ 0.88
Pcdha1Q91Y21 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdha1Q91Y21 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Pcdha1Q91Y21 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha1Q91Y21 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha1Q91Y21 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha1Q91Y21 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.57■□□□□ 0.88
Pcdha1Q91Y21 Gm10493-201ENSMUST00000097270 612 ntBASIC20.57■□□□□ 0.88
Pcdha1Q91Y21 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha1Q91Y21 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha1Q91Y21 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Pcdha1Q91Y21 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha1Q91Y21 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pcdha1Q91Y21 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.56■□□□□ 0.88
Pcdha1Q91Y21 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha1Q91Y21 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
Pcdha1Q91Y21 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.56■□□□□ 0.88
Pcdha1Q91Y21 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha1Q91Y21 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha1Q91Y21 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha1Q91Y21 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha1Q91Y21 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha1Q91Y21 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Pcdha1Q91Y21 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha1Q91Y21 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha1Q91Y21 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha1Q91Y21 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha1Q91Y21 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha1Q91Y21 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha1Q91Y21 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Pcdha1Q91Y21 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Pcdha1Q91Y21 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha1Q91Y21 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Pcdha1Q91Y21 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.55■□□□□ 0.88
Pcdha1Q91Y21 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha1Q91Y21 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha1Q91Y21 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Pcdha1Q91Y21 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.54■□□□□ 0.88
Pcdha1Q91Y21 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha1Q91Y21 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha1Q91Y21 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Pcdha1Q91Y21 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha1Q91Y21 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha1Q91Y21 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms