Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha3Q91Y16 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha3Q91Y16 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Pcdha3Q91Y16 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha3Q91Y16 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha3Q91Y16 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.63■□□□□ 0.89
Pcdha3Q91Y16 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha3Q91Y16 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.63■□□□□ 0.89
Pcdha3Q91Y16 Gm15039-201ENSMUST00000118914 875 ntBASIC20.63■□□□□ 0.89
Pcdha3Q91Y16 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha3Q91Y16 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.63■□□□□ 0.89
Pcdha3Q91Y16 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.63■□□□□ 0.89
Pcdha3Q91Y16 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha3Q91Y16 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Pcdha3Q91Y16 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha3Q91Y16 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha3Q91Y16 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha3Q91Y16 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha3Q91Y16 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha3Q91Y16 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha3Q91Y16 Gm45417-201ENSMUST00000209533 758 ntBASIC20.62■□□□□ 0.89
Pcdha3Q91Y16 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha3Q91Y16 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Pcdha3Q91Y16 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha3Q91Y16 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha3Q91Y16 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pcdha3Q91Y16 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha3Q91Y16 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha3Q91Y16 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha3Q91Y16 Golph3-202ENSMUST00000226517 2359 ntBASIC20.61■□□□□ 0.89
Pcdha3Q91Y16 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Pcdha3Q91Y16 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha3Q91Y16 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Pcdha3Q91Y16 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
Pcdha3Q91Y16 Mir6236-201ENSMUST00000184437 123 ntBASIC20.61■□□□□ 0.89
Pcdha3Q91Y16 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
Pcdha3Q91Y16 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha3Q91Y16 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha3Q91Y16 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha3Q91Y16 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha3Q91Y16 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha3Q91Y16 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha3Q91Y16 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Pcdha3Q91Y16 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha3Q91Y16 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Pcdha3Q91Y16 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha3Q91Y16 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha3Q91Y16 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.6■□□□□ 0.89
Pcdha3Q91Y16 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha3Q91Y16 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Pcdha3Q91Y16 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha3Q91Y16 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha3Q91Y16 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha3Q91Y16 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha3Q91Y16 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha3Q91Y16 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.59■□□□□ 0.89
Pcdha3Q91Y16 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha3Q91Y16 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha3Q91Y16 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha3Q91Y16 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha3Q91Y16 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha3Q91Y16 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha3Q91Y16 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha3Q91Y16 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.58■□□□□ 0.89
Pcdha3Q91Y16 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Pcdha3Q91Y16 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha3Q91Y16 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha3Q91Y16 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha3Q91Y16 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
Pcdha3Q91Y16 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.58■□□□□ 0.88
Pcdha3Q91Y16 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdha3Q91Y16 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.58■□□□□ 0.88
Pcdha3Q91Y16 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdha3Q91Y16 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha3Q91Y16 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Pcdha3Q91Y16 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha3Q91Y16 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha3Q91Y16 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.57■□□□□ 0.88
Pcdha3Q91Y16 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha3Q91Y16 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pcdha3Q91Y16 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha3Q91Y16 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha3Q91Y16 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha3Q91Y16 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha3Q91Y16 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.56■□□□□ 0.88
Pcdha3Q91Y16 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Pcdha3Q91Y16 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Pcdha3Q91Y16 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha3Q91Y16 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha3Q91Y16 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha3Q91Y16 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.55■□□□□ 0.88
Pcdha3Q91Y16 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha3Q91Y16 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha3Q91Y16 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha3Q91Y16 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha3Q91Y16 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha3Q91Y16 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcdha3Q91Y16 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha3Q91Y16 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha3Q91Y16 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms