Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.95■□□□□ 0.62
Pcdhb20Q91XZ9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb20Q91XZ9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhb20Q91XZ9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb20Q91XZ9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb20Q91XZ9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb20Q91XZ9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb20Q91XZ9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb20Q91XZ9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhb20Q91XZ9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb20Q91XZ9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb20Q91XZ9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb20Q91XZ9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb20Q91XZ9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb20Q91XZ9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb20Q91XZ9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb20Q91XZ9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.93■□□□□ 0.62
Pcdhb20Q91XZ9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb20Q91XZ9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb20Q91XZ9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb20Q91XZ9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdhb20Q91XZ9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb20Q91XZ9 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.92■□□□□ 0.62
Pcdhb20Q91XZ9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.92■□□□□ 0.62
Pcdhb20Q91XZ9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb20Q91XZ9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb20Q91XZ9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb20Q91XZ9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb20Q91XZ9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb20Q91XZ9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb20Q91XZ9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb20Q91XZ9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb20Q91XZ9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb20Q91XZ9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb20Q91XZ9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Pcdhb20Q91XZ9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb20Q91XZ9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb20Q91XZ9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.91■□□□□ 0.62
Pcdhb20Q91XZ9 Gm11421-201ENSMUST00000122124 294 ntBASIC18.91■□□□□ 0.62
Pcdhb20Q91XZ9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb20Q91XZ9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb20Q91XZ9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb20Q91XZ9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb20Q91XZ9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb20Q91XZ9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Pcdhb20Q91XZ9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb20Q91XZ9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb20Q91XZ9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb20Q91XZ9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb20Q91XZ9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Pcdhb20Q91XZ9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb20Q91XZ9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb20Q91XZ9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb20Q91XZ9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb20Q91XZ9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.9■□□□□ 0.62
Pcdhb20Q91XZ9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb20Q91XZ9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Pcdhb20Q91XZ9 CT009738.1-201ENSMUST00000219031 809 ntBASIC18.9■□□□□ 0.62
Pcdhb20Q91XZ9 Gm40848-201ENSMUST00000221998 324 ntBASIC18.9■□□□□ 0.62
Pcdhb20Q91XZ9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Pcdhb20Q91XZ9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Pcdhb20Q91XZ9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb20Q91XZ9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb20Q91XZ9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Pcdhb20Q91XZ9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.89■□□□□ 0.61
Pcdhb20Q91XZ9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb20Q91XZ9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb20Q91XZ9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.89■□□□□ 0.61
Pcdhb20Q91XZ9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb20Q91XZ9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.89■□□□□ 0.61
Pcdhb20Q91XZ9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb20Q91XZ9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Pcdhb20Q91XZ9 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.89■□□□□ 0.61
Pcdhb20Q91XZ9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Pcdhb20Q91XZ9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb20Q91XZ9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Pcdhb20Q91XZ9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.88■□□□□ 0.61
Pcdhb20Q91XZ9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb20Q91XZ9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Pcdhb20Q91XZ9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb20Q91XZ9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb20Q91XZ9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb20Q91XZ9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb20Q91XZ9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb20Q91XZ9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb20Q91XZ9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb20Q91XZ9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb20Q91XZ9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Pcdhb20Q91XZ9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb20Q91XZ9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.87■□□□□ 0.61
Pcdhb20Q91XZ9 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb20Q91XZ9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb20Q91XZ9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb20Q91XZ9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb20Q91XZ9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb20Q91XZ9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb20Q91XZ9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb20Q91XZ9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb20Q91XZ9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb20Q91XZ9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms