Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb3Q91XZ7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb3Q91XZ7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb3Q91XZ7 Gm14117-201ENSMUST00000122417 843 ntBASIC19.62■□□□□ 0.73
Pcdhb3Q91XZ7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Pcdhb3Q91XZ7 Gm9959-201ENSMUST00000068277 390 ntBASIC19.62■□□□□ 0.73
Pcdhb3Q91XZ7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb3Q91XZ7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb3Q91XZ7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb3Q91XZ7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb3Q91XZ7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdhb3Q91XZ7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb3Q91XZ7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb3Q91XZ7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Pcdhb3Q91XZ7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb3Q91XZ7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb3Q91XZ7 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.61■□□□□ 0.73
Pcdhb3Q91XZ7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdhb3Q91XZ7 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.61■□□□□ 0.73
Pcdhb3Q91XZ7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb3Q91XZ7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb3Q91XZ7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb3Q91XZ7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb3Q91XZ7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb3Q91XZ7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhb3Q91XZ7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb3Q91XZ7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb3Q91XZ7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhb3Q91XZ7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb3Q91XZ7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb3Q91XZ7 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.6■□□□□ 0.73
Pcdhb3Q91XZ7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb3Q91XZ7 Gm44487-201ENSMUST00000205145 325 ntBASIC19.6■□□□□ 0.73
Pcdhb3Q91XZ7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhb3Q91XZ7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb3Q91XZ7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb3Q91XZ7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb3Q91XZ7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pcdhb3Q91XZ7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb3Q91XZ7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb3Q91XZ7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb3Q91XZ7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb3Q91XZ7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb3Q91XZ7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb3Q91XZ7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb3Q91XZ7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb3Q91XZ7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Pcdhb3Q91XZ7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb3Q91XZ7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb3Q91XZ7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb3Q91XZ7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb3Q91XZ7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb3Q91XZ7 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.58■□□□□ 0.72
Pcdhb3Q91XZ7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.58■□□□□ 0.72
Pcdhb3Q91XZ7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb3Q91XZ7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb3Q91XZ7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb3Q91XZ7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb3Q91XZ7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb3Q91XZ7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.57■□□□□ 0.72
Pcdhb3Q91XZ7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb3Q91XZ7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Pcdhb3Q91XZ7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.57■□□□□ 0.72
Pcdhb3Q91XZ7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb3Q91XZ7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Pcdhb3Q91XZ7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb3Q91XZ7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb3Q91XZ7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb3Q91XZ7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb3Q91XZ7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb3Q91XZ7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb3Q91XZ7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb3Q91XZ7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.56■□□□□ 0.72
Pcdhb3Q91XZ7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Pcdhb3Q91XZ7 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.56■□□□□ 0.72
Pcdhb3Q91XZ7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Pcdhb3Q91XZ7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb3Q91XZ7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb3Q91XZ7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb3Q91XZ7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Pcdhb3Q91XZ7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Pcdhb3Q91XZ7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb3Q91XZ7 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.55■□□□□ 0.72
Pcdhb3Q91XZ7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb3Q91XZ7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb3Q91XZ7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb3Q91XZ7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb3Q91XZ7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb3Q91XZ7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb3Q91XZ7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.55■□□□□ 0.72
Pcdhb3Q91XZ7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb3Q91XZ7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb3Q91XZ7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb3Q91XZ7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb3Q91XZ7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb3Q91XZ7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb3Q91XZ7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Pcdhb3Q91XZ7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.54■□□□□ 0.72
Pcdhb3Q91XZ7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb3Q91XZ7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms