Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga9Q91XX9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga9Q91XX9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga9Q91XX9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.5■□□□□ 0.71
Pcdhga9Q91XX9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.5■□□□□ 0.71
Pcdhga9Q91XX9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.5■□□□□ 0.71
Pcdhga9Q91XX9 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.5■□□□□ 0.71
Pcdhga9Q91XX9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga9Q91XX9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga9Q91XX9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga9Q91XX9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Pcdhga9Q91XX9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga9Q91XX9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga9Q91XX9 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.5■□□□□ 0.71
Pcdhga9Q91XX9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga9Q91XX9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga9Q91XX9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga9Q91XX9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga9Q91XX9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga9Q91XX9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Pcdhga9Q91XX9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga9Q91XX9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga9Q91XX9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Pcdhga9Q91XX9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga9Q91XX9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Pcdhga9Q91XX9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Pcdhga9Q91XX9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Pcdhga9Q91XX9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga9Q91XX9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.49■□□□□ 0.71
Pcdhga9Q91XX9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga9Q91XX9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga9Q91XX9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga9Q91XX9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Pcdhga9Q91XX9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga9Q91XX9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga9Q91XX9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga9Q91XX9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga9Q91XX9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga9Q91XX9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.48■□□□□ 0.71
Pcdhga9Q91XX9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga9Q91XX9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga9Q91XX9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga9Q91XX9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga9Q91XX9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga9Q91XX9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Pcdhga9Q91XX9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Pcdhga9Q91XX9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.48■□□□□ 0.71
Pcdhga9Q91XX9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.48■□□□□ 0.71
Pcdhga9Q91XX9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.48■□□□□ 0.71
Pcdhga9Q91XX9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga9Q91XX9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga9Q91XX9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
Pcdhga9Q91XX9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Pcdhga9Q91XX9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhga9Q91XX9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pcdhga9Q91XX9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhga9Q91XX9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.47■□□□□ 0.71
Pcdhga9Q91XX9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhga9Q91XX9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pcdhga9Q91XX9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhga9Q91XX9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhga9Q91XX9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.46■□□□□ 0.71
Pcdhga9Q91XX9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhga9Q91XX9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhga9Q91XX9 Gm8493-201ENSMUST00000196881 489 ntBASIC19.46■□□□□ 0.71
Pcdhga9Q91XX9 Gm43017-201ENSMUST00000198296 752 ntBASIC19.46■□□□□ 0.71
Pcdhga9Q91XX9 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.46■□□□□ 0.71
Pcdhga9Q91XX9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhga9Q91XX9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhga9Q91XX9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhga9Q91XX9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.46■□□□□ 0.71
Pcdhga9Q91XX9 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.45■□□□□ 0.7
Pcdhga9Q91XX9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga9Q91XX9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga9Q91XX9 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.45■□□□□ 0.7
Pcdhga9Q91XX9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.45■□□□□ 0.7
Pcdhga9Q91XX9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga9Q91XX9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga9Q91XX9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga9Q91XX9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga9Q91XX9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga9Q91XX9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga9Q91XX9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga9Q91XX9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga9Q91XX9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga9Q91XX9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga9Q91XX9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pcdhga9Q91XX9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhga9Q91XX9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhga9Q91XX9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhga9Q91XX9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhga9Q91XX9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhga9Q91XX9 Gm8495-201ENSMUST00000188740 694 ntBASIC19.44■□□□□ 0.7
Pcdhga9Q91XX9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pcdhga9Q91XX9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhga9Q91XX9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhga9Q91XX9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhga9Q91XX9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhga9Q91XX9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhga9Q91XX9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms