Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Pcdhgb1Q91XX8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhgb1Q91XX8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdhgb1Q91XX8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhgb1Q91XX8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhgb1Q91XX8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgb1Q91XX8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgb1Q91XX8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Pcdhgb1Q91XX8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgb1Q91XX8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.49■□□□□ 0.87
Pcdhgb1Q91XX8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pcdhgb1Q91XX8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgb1Q91XX8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgb1Q91XX8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.49■□□□□ 0.87
Pcdhgb1Q91XX8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgb1Q91XX8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgb1Q91XX8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgb1Q91XX8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Pcdhgb1Q91XX8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgb1Q91XX8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgb1Q91XX8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgb1Q91XX8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Pcdhgb1Q91XX8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgb1Q91XX8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Pcdhgb1Q91XX8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgb1Q91XX8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgb1Q91XX8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgb1Q91XX8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgb1Q91XX8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgb1Q91XX8 Notumos-201ENSMUST00000151998 2659 ntBASIC20.48■□□□□ 0.87
Pcdhgb1Q91XX8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgb1Q91XX8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgb1Q91XX8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgb1Q91XX8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgb1Q91XX8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Pcdhgb1Q91XX8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.47■□□□□ 0.87
Pcdhgb1Q91XX8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Pcdhgb1Q91XX8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgb1Q91XX8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pcdhgb1Q91XX8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgb1Q91XX8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgb1Q91XX8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgb1Q91XX8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.46■□□□□ 0.87
Pcdhgb1Q91XX8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgb1Q91XX8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pcdhgb1Q91XX8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.46■□□□□ 0.87
Pcdhgb1Q91XX8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgb1Q91XX8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgb1Q91XX8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pcdhgb1Q91XX8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgb1Q91XX8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgb1Q91XX8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgb1Q91XX8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdhgb1Q91XX8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgb1Q91XX8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgb1Q91XX8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.45■□□□□ 0.86
Pcdhgb1Q91XX8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgb1Q91XX8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.45■□□□□ 0.86
Pcdhgb1Q91XX8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgb1Q91XX8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgb1Q91XX8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgb1Q91XX8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgb1Q91XX8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Pcdhgb1Q91XX8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhgb1Q91XX8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhgb1Q91XX8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.44■□□□□ 0.86
Pcdhgb1Q91XX8 Gm11421-201ENSMUST00000122124 294 ntBASIC20.44■□□□□ 0.86
Pcdhgb1Q91XX8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhgb1Q91XX8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.44■□□□□ 0.86
Pcdhgb1Q91XX8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
Pcdhgb1Q91XX8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhgb1Q91XX8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.44■□□□□ 0.86
Pcdhgb1Q91XX8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhgb1Q91XX8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhgb1Q91XX8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.43■□□□□ 0.86
Pcdhgb1Q91XX8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
Pcdhgb1Q91XX8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhgb1Q91XX8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhgb1Q91XX8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhgb1Q91XX8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhgb1Q91XX8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhgb1Q91XX8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhgb1Q91XX8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhgb1Q91XX8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgb1Q91XX8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.42■□□□□ 0.86
Pcdhgb1Q91XX8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgb1Q91XX8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgb1Q91XX8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgb1Q91XX8 Gm10493-201ENSMUST00000097270 612 ntBASIC20.42■□□□□ 0.86
Pcdhgb1Q91XX8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgb1Q91XX8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgb1Q91XX8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgb1Q91XX8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.42■□□□□ 0.86
Pcdhgb1Q91XX8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhgb1Q91XX8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhgb1Q91XX8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhgb1Q91XX8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhgb1Q91XX8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Pcdhgb1Q91XX8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhgb1Q91XX8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms