Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb11Q91UZ8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pcdhb11Q91UZ8 Gm12251-201ENSMUST00000117893 792 ntBASIC20.22■□□□□ 0.83
Pcdhb11Q91UZ8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pcdhb11Q91UZ8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pcdhb11Q91UZ8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb11Q91UZ8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pcdhb11Q91UZ8 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.22■□□□□ 0.83
Pcdhb11Q91UZ8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Pcdhb11Q91UZ8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb11Q91UZ8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb11Q91UZ8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb11Q91UZ8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb11Q91UZ8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pcdhb11Q91UZ8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.21■□□□□ 0.83
Pcdhb11Q91UZ8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.21■□□□□ 0.83
Pcdhb11Q91UZ8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb11Q91UZ8 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.21■□□□□ 0.83
Pcdhb11Q91UZ8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb11Q91UZ8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb11Q91UZ8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pcdhb11Q91UZ8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb11Q91UZ8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhb11Q91UZ8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhb11Q91UZ8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb11Q91UZ8 Spcs1-204ENSMUST00000226782 949 ntBASIC20.2■□□□□ 0.82
Pcdhb11Q91UZ8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pcdhb11Q91UZ8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb11Q91UZ8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb11Q91UZ8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb11Q91UZ8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhb11Q91UZ8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb11Q91UZ8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb11Q91UZ8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb11Q91UZ8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb11Q91UZ8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb11Q91UZ8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb11Q91UZ8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb11Q91UZ8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.19■□□□□ 0.82
Pcdhb11Q91UZ8 Gm45417-201ENSMUST00000209533 758 ntBASIC20.19■□□□□ 0.82
Pcdhb11Q91UZ8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb11Q91UZ8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb11Q91UZ8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb11Q91UZ8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pcdhb11Q91UZ8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.19■□□□□ 0.82
Pcdhb11Q91UZ8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Pcdhb11Q91UZ8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb11Q91UZ8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Pcdhb11Q91UZ8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb11Q91UZ8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb11Q91UZ8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb11Q91UZ8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb11Q91UZ8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb11Q91UZ8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb11Q91UZ8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb11Q91UZ8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb11Q91UZ8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.18■□□□□ 0.82
Pcdhb11Q91UZ8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pcdhb11Q91UZ8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhb11Q91UZ8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pcdhb11Q91UZ8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pcdhb11Q91UZ8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb11Q91UZ8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.17■□□□□ 0.82
Pcdhb11Q91UZ8 Mir7075-201ENSMUST00000184187 82 ntBASIC20.17■□□□□ 0.82
Pcdhb11Q91UZ8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb11Q91UZ8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb11Q91UZ8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb11Q91UZ8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.17■□□□□ 0.82
Pcdhb11Q91UZ8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.17■□□□□ 0.82
Pcdhb11Q91UZ8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb11Q91UZ8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb11Q91UZ8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Pcdhb11Q91UZ8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcdhb11Q91UZ8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb11Q91UZ8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb11Q91UZ8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb11Q91UZ8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pcdhb11Q91UZ8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb11Q91UZ8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb11Q91UZ8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb11Q91UZ8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb11Q91UZ8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb11Q91UZ8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb11Q91UZ8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb11Q91UZ8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb11Q91UZ8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb11Q91UZ8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb11Q91UZ8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb11Q91UZ8 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.15■□□□□ 0.82
Pcdhb11Q91UZ8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.15■□□□□ 0.82
Pcdhb11Q91UZ8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.15■□□□□ 0.82
Pcdhb11Q91UZ8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb11Q91UZ8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhb11Q91UZ8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb11Q91UZ8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.15■□□□□ 0.82
Pcdhb11Q91UZ8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb11Q91UZ8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb11Q91UZ8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb11Q91UZ8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Pcdhb11Q91UZ8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms