Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TraipQ8VIG6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TraipQ8VIG6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TraipQ8VIG6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TraipQ8VIG6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TraipQ8VIG6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TraipQ8VIG6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TraipQ8VIG6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TraipQ8VIG6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TraipQ8VIG6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TraipQ8VIG6 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.06■□□□□ 0.96
TraipQ8VIG6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TraipQ8VIG6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TraipQ8VIG6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TraipQ8VIG6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TraipQ8VIG6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TraipQ8VIG6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TraipQ8VIG6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TraipQ8VIG6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TraipQ8VIG6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TraipQ8VIG6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TraipQ8VIG6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TraipQ8VIG6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TraipQ8VIG6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TraipQ8VIG6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TraipQ8VIG6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TraipQ8VIG6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TraipQ8VIG6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TraipQ8VIG6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TraipQ8VIG6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TraipQ8VIG6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.04■□□□□ 0.96
TraipQ8VIG6 Gm13234-201ENSMUST00000120010 747 ntBASIC21.04■□□□□ 0.96
TraipQ8VIG6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TraipQ8VIG6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TraipQ8VIG6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.04■□□□□ 0.96
TraipQ8VIG6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TraipQ8VIG6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TraipQ8VIG6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TraipQ8VIG6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TraipQ8VIG6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TraipQ8VIG6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.03■□□□□ 0.96
TraipQ8VIG6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TraipQ8VIG6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TraipQ8VIG6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.03■□□□□ 0.96
TraipQ8VIG6 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.03■□□□□ 0.96
TraipQ8VIG6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TraipQ8VIG6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TraipQ8VIG6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TraipQ8VIG6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TraipQ8VIG6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TraipQ8VIG6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TraipQ8VIG6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TraipQ8VIG6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TraipQ8VIG6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TraipQ8VIG6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TraipQ8VIG6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TraipQ8VIG6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TraipQ8VIG6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.02■□□□□ 0.96
TraipQ8VIG6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.02■□□□□ 0.96
TraipQ8VIG6 Gm37179-201ENSMUST00000194862 823 ntBASIC21.02■□□□□ 0.96
TraipQ8VIG6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TraipQ8VIG6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TraipQ8VIG6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
TraipQ8VIG6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TraipQ8VIG6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TraipQ8VIG6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
TraipQ8VIG6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TraipQ8VIG6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TraipQ8VIG6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TraipQ8VIG6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.01■□□□□ 0.95
TraipQ8VIG6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TraipQ8VIG6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TraipQ8VIG6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.01■□□□□ 0.95
TraipQ8VIG6 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TraipQ8VIG6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TraipQ8VIG6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TraipQ8VIG6 Gm9988-201ENSMUST00000069786 435 ntBASIC21.01■□□□□ 0.95
TraipQ8VIG6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21■□□□□ 0.95
TraipQ8VIG6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TraipQ8VIG6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TraipQ8VIG6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21■□□□□ 0.95
TraipQ8VIG6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21■□□□□ 0.95
TraipQ8VIG6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21■□□□□ 0.95
TraipQ8VIG6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TraipQ8VIG6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TraipQ8VIG6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TraipQ8VIG6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21■□□□□ 0.95
TraipQ8VIG6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.99■□□□□ 0.95
TraipQ8VIG6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TraipQ8VIG6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TraipQ8VIG6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.99■□□□□ 0.95
TraipQ8VIG6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TraipQ8VIG6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TraipQ8VIG6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TraipQ8VIG6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.99■□□□□ 0.95
TraipQ8VIG6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TraipQ8VIG6 AA386476-201ENSMUST00000098781 1665 ntBASIC20.99■□□□□ 0.95
TraipQ8VIG6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TraipQ8VIG6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TraipQ8VIG6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms