Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cspg4Q8VHY0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cspg4Q8VHY0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cspg4Q8VHY0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cspg4Q8VHY0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cspg4Q8VHY0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cspg4Q8VHY0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Cspg4Q8VHY0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg4Q8VHY0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg4Q8VHY0 Gm11643-201ENSMUST00000119578 864 ntBASIC17.09■□□□□ 0.33
Cspg4Q8VHY0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg4Q8VHY0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg4Q8VHY0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg4Q8VHY0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg4Q8VHY0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg4Q8VHY0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg4Q8VHY0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg4Q8VHY0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.09■□□□□ 0.33
Cspg4Q8VHY0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg4Q8VHY0 Gm5408-201ENSMUST00000197998 747 ntBASIC17.09■□□□□ 0.33
Cspg4Q8VHY0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cspg4Q8VHY0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg4Q8VHY0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg4Q8VHY0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cspg4Q8VHY0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cspg4Q8VHY0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cspg4Q8VHY0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.08■□□□□ 0.33
Cspg4Q8VHY0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cspg4Q8VHY0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Cspg4Q8VHY0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cspg4Q8VHY0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cspg4Q8VHY0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cspg4Q8VHY0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cspg4Q8VHY0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.08■□□□□ 0.32
Cspg4Q8VHY0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cspg4Q8VHY0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.08■□□□□ 0.32
Cspg4Q8VHY0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.08■□□□□ 0.32
Cspg4Q8VHY0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cspg4Q8VHY0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg4Q8VHY0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.07■□□□□ 0.32
Cspg4Q8VHY0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg4Q8VHY0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg4Q8VHY0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg4Q8VHY0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg4Q8VHY0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.07■□□□□ 0.32
Cspg4Q8VHY0 Gm6365-201ENSMUST00000054711 744 ntBASIC17.07■□□□□ 0.32
Cspg4Q8VHY0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cspg4Q8VHY0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cspg4Q8VHY0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cspg4Q8VHY0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cspg4Q8VHY0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cspg4Q8VHY0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cspg4Q8VHY0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cspg4Q8VHY0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cspg4Q8VHY0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Cspg4Q8VHY0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.05■□□□□ 0.32
Cspg4Q8VHY0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cspg4Q8VHY0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.05■□□□□ 0.32
Cspg4Q8VHY0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cspg4Q8VHY0 Gm6211-202ENSMUST00000167849 925 ntBASIC17.05■□□□□ 0.32
Cspg4Q8VHY0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cspg4Q8VHY0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cspg4Q8VHY0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cspg4Q8VHY0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cspg4Q8VHY0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cspg4Q8VHY0 Trmt13-210ENSMUST00000198454 880 ntBASIC17.05■□□□□ 0.32
Cspg4Q8VHY0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cspg4Q8VHY0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cspg4Q8VHY0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cspg4Q8VHY0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cspg4Q8VHY0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cspg4Q8VHY0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cspg4Q8VHY0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cspg4Q8VHY0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cspg4Q8VHY0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cspg4Q8VHY0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cspg4Q8VHY0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cspg4Q8VHY0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cspg4Q8VHY0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cspg4Q8VHY0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cspg4Q8VHY0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.04■□□□□ 0.32
Cspg4Q8VHY0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cspg4Q8VHY0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cspg4Q8VHY0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.04■□□□□ 0.32
Cspg4Q8VHY0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.04■□□□□ 0.32
Cspg4Q8VHY0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.03■□□□□ 0.32
Cspg4Q8VHY0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cspg4Q8VHY0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cspg4Q8VHY0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cspg4Q8VHY0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cspg4Q8VHY0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cspg4Q8VHY0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cspg4Q8VHY0 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.03■□□□□ 0.32
Cspg4Q8VHY0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cspg4Q8VHY0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cspg4Q8VHY0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.02■□□□□ 0.32
Cspg4Q8VHY0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.02■□□□□ 0.32
Cspg4Q8VHY0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.02■□□□□ 0.32
Cspg4Q8VHY0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.02■□□□□ 0.32
Cspg4Q8VHY0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms