Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ndc1Q8VCB1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ndc1Q8VCB1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ndc1Q8VCB1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Ndc1Q8VCB1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ndc1Q8VCB1 Mir6236-201ENSMUST00000184437 123 ntBASIC18.58■□□□□ 0.56
Ndc1Q8VCB1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Ndc1Q8VCB1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.58■□□□□ 0.56
Ndc1Q8VCB1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ndc1Q8VCB1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Ndc1Q8VCB1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Ndc1Q8VCB1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ndc1Q8VCB1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Ndc1Q8VCB1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ndc1Q8VCB1 Smad6-203ENSMUST00000179458 273 ntBASIC18.57■□□□□ 0.56
Ndc1Q8VCB1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.57■□□□□ 0.56
Ndc1Q8VCB1 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.57■□□□□ 0.56
Ndc1Q8VCB1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ndc1Q8VCB1 Gm5874-201ENSMUST00000096101 508 ntBASIC18.57■□□□□ 0.56
Ndc1Q8VCB1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ndc1Q8VCB1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ndc1Q8VCB1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ndc1Q8VCB1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ndc1Q8VCB1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ndc1Q8VCB1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ndc1Q8VCB1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ndc1Q8VCB1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ndc1Q8VCB1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ndc1Q8VCB1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ndc1Q8VCB1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc1Q8VCB1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc1Q8VCB1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc1Q8VCB1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc1Q8VCB1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.55■□□□□ 0.56
Ndc1Q8VCB1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc1Q8VCB1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc1Q8VCB1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.55■□□□□ 0.56
Ndc1Q8VCB1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc1Q8VCB1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndc1Q8VCB1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ndc1Q8VCB1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ndc1Q8VCB1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ndc1Q8VCB1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ndc1Q8VCB1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ndc1Q8VCB1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ndc1Q8VCB1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ndc1Q8VCB1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Ndc1Q8VCB1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ndc1Q8VCB1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ndc1Q8VCB1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ndc1Q8VCB1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.54■□□□□ 0.56
Ndc1Q8VCB1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ndc1Q8VCB1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ndc1Q8VCB1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ndc1Q8VCB1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ndc1Q8VCB1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Ndc1Q8VCB1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.53■□□□□ 0.56
Ndc1Q8VCB1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ndc1Q8VCB1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ndc1Q8VCB1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Ndc1Q8VCB1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.53■□□□□ 0.56
Ndc1Q8VCB1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ndc1Q8VCB1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ndc1Q8VCB1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ndc1Q8VCB1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ndc1Q8VCB1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ndc1Q8VCB1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ndc1Q8VCB1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ndc1Q8VCB1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ndc1Q8VCB1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ndc1Q8VCB1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.52■□□□□ 0.56
Ndc1Q8VCB1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ndc1Q8VCB1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ndc1Q8VCB1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ndc1Q8VCB1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ndc1Q8VCB1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc1Q8VCB1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc1Q8VCB1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Ndc1Q8VCB1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.51■□□□□ 0.55
Ndc1Q8VCB1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc1Q8VCB1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc1Q8VCB1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc1Q8VCB1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc1Q8VCB1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc1Q8VCB1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc1Q8VCB1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc1Q8VCB1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Ndc1Q8VCB1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndc1Q8VCB1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ndc1Q8VCB1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.5■□□□□ 0.55
Ndc1Q8VCB1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ndc1Q8VCB1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.5■□□□□ 0.55
Ndc1Q8VCB1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.5■□□□□ 0.55
Ndc1Q8VCB1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ndc1Q8VCB1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ndc1Q8VCB1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ndc1Q8VCB1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ndc1Q8VCB1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ndc1Q8VCB1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ndc1Q8VCB1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms