Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps39Q8R5L3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps39Q8R5L3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Vps39Q8R5L3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps39Q8R5L3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.72■□□□□ 0.75
Vps39Q8R5L3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps39Q8R5L3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps39Q8R5L3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.72■□□□□ 0.75
Vps39Q8R5L3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.72■□□□□ 0.75
Vps39Q8R5L3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Vps39Q8R5L3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps39Q8R5L3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Vps39Q8R5L3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps39Q8R5L3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.71■□□□□ 0.75
Vps39Q8R5L3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Vps39Q8R5L3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps39Q8R5L3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps39Q8R5L3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps39Q8R5L3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.71■□□□□ 0.75
Vps39Q8R5L3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.71■□□□□ 0.75
Vps39Q8R5L3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.71■□□□□ 0.75
Vps39Q8R5L3 Gm45102-201ENSMUST00000207427 857 ntBASIC19.71■□□□□ 0.75
Vps39Q8R5L3 Rps24-207ENSMUST00000224568 714 ntBASIC19.71■□□□□ 0.75
Vps39Q8R5L3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps39Q8R5L3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps39Q8R5L3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps39Q8R5L3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps39Q8R5L3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps39Q8R5L3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps39Q8R5L3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vps39Q8R5L3 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.7■□□□□ 0.74
Vps39Q8R5L3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vps39Q8R5L3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vps39Q8R5L3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps39Q8R5L3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps39Q8R5L3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Vps39Q8R5L3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vps39Q8R5L3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps39Q8R5L3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vps39Q8R5L3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.69■□□□□ 0.74
Vps39Q8R5L3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps39Q8R5L3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.69■□□□□ 0.74
Vps39Q8R5L3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps39Q8R5L3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps39Q8R5L3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps39Q8R5L3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Vps39Q8R5L3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Vps39Q8R5L3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps39Q8R5L3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps39Q8R5L3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps39Q8R5L3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps39Q8R5L3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.68■□□□□ 0.74
Vps39Q8R5L3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vps39Q8R5L3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.68■□□□□ 0.74
Vps39Q8R5L3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vps39Q8R5L3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.68■□□□□ 0.74
Vps39Q8R5L3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Vps39Q8R5L3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.68■□□□□ 0.74
Vps39Q8R5L3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps39Q8R5L3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Vps39Q8R5L3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vps39Q8R5L3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vps39Q8R5L3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.67■□□□□ 0.74
Vps39Q8R5L3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Vps39Q8R5L3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps39Q8R5L3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps39Q8R5L3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vps39Q8R5L3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps39Q8R5L3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps39Q8R5L3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps39Q8R5L3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps39Q8R5L3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vps39Q8R5L3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Vps39Q8R5L3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps39Q8R5L3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps39Q8R5L3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Vps39Q8R5L3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps39Q8R5L3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps39Q8R5L3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Vps39Q8R5L3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps39Q8R5L3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps39Q8R5L3 Gm14117-201ENSMUST00000122417 843 ntBASIC19.66■□□□□ 0.74
Vps39Q8R5L3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
Vps39Q8R5L3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Vps39Q8R5L3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Vps39Q8R5L3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.66■□□□□ 0.74
Vps39Q8R5L3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps39Q8R5L3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps39Q8R5L3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps39Q8R5L3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Vps39Q8R5L3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps39Q8R5L3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps39Q8R5L3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.66■□□□□ 0.74
Vps39Q8R5L3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps39Q8R5L3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Vps39Q8R5L3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps39Q8R5L3 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.65■□□□□ 0.74
Vps39Q8R5L3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.65■□□□□ 0.74
Vps39Q8R5L3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps39Q8R5L3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms