Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3kbp1Q8R550 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3kbp1Q8R550 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3kbp1Q8R550 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3kbp1Q8R550 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3kbp1Q8R550 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3kbp1Q8R550 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3kbp1Q8R550 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3kbp1Q8R550 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Sh3kbp1Q8R550 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3kbp1Q8R550 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Sh3kbp1Q8R550 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3kbp1Q8R550 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3kbp1Q8R550 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3kbp1Q8R550 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3kbp1Q8R550 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3kbp1Q8R550 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3kbp1Q8R550 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Sh3kbp1Q8R550 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3kbp1Q8R550 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.3■□□□□ 0.84
Sh3kbp1Q8R550 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.3■□□□□ 0.84
Sh3kbp1Q8R550 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3kbp1Q8R550 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3kbp1Q8R550 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Sh3kbp1Q8R550 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.3■□□□□ 0.84
Sh3kbp1Q8R550 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Sh3kbp1Q8R550 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Sh3kbp1Q8R550 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3kbp1Q8R550 Spcs1-204ENSMUST00000226782 949 ntBASIC20.29■□□□□ 0.84
Sh3kbp1Q8R550 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Sh3kbp1Q8R550 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Sh3kbp1Q8R550 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.29■□□□□ 0.84
Sh3kbp1Q8R550 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Sh3kbp1Q8R550 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3kbp1Q8R550 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3kbp1Q8R550 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3kbp1Q8R550 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.28■□□□□ 0.84
Sh3kbp1Q8R550 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Sh3kbp1Q8R550 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Sh3kbp1Q8R550 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3kbp1Q8R550 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3kbp1Q8R550 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3kbp1Q8R550 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Sh3kbp1Q8R550 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3kbp1Q8R550 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3kbp1Q8R550 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3kbp1Q8R550 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.27■□□□□ 0.84
Sh3kbp1Q8R550 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
Sh3kbp1Q8R550 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Sh3kbp1Q8R550 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3kbp1Q8R550 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3kbp1Q8R550 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.27■□□□□ 0.84
Sh3kbp1Q8R550 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3kbp1Q8R550 Gm5874-201ENSMUST00000096101 508 ntBASIC20.27■□□□□ 0.84
Sh3kbp1Q8R550 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3kbp1Q8R550 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.26■□□□□ 0.83
Sh3kbp1Q8R550 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3kbp1Q8R550 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.26■□□□□ 0.83
Sh3kbp1Q8R550 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
Sh3kbp1Q8R550 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3kbp1Q8R550 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3kbp1Q8R550 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3kbp1Q8R550 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Sh3kbp1Q8R550 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.26■□□□□ 0.83
Sh3kbp1Q8R550 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3kbp1Q8R550 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3kbp1Q8R550 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Sh3kbp1Q8R550 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3kbp1Q8R550 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3kbp1Q8R550 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3kbp1Q8R550 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3kbp1Q8R550 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3kbp1Q8R550 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3kbp1Q8R550 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3kbp1Q8R550 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3kbp1Q8R550 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Sh3kbp1Q8R550 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3kbp1Q8R550 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Sh3kbp1Q8R550 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3kbp1Q8R550 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3kbp1Q8R550 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3kbp1Q8R550 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3kbp1Q8R550 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3kbp1Q8R550 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3kbp1Q8R550 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.25■□□□□ 0.83
Sh3kbp1Q8R550 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3kbp1Q8R550 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3kbp1Q8R550 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Sh3kbp1Q8R550 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.24■□□□□ 0.83
Sh3kbp1Q8R550 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Sh3kbp1Q8R550 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.24■□□□□ 0.83
Sh3kbp1Q8R550 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3kbp1Q8R550 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Sh3kbp1Q8R550 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.24■□□□□ 0.83
Sh3kbp1Q8R550 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3kbp1Q8R550 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3kbp1Q8R550 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3kbp1Q8R550 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3kbp1Q8R550 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3kbp1Q8R550 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms