Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Chmp7Q8R1T1 Gm27011-201ENSMUST00000182352 972 ntBASIC25.38■■□□□ 1.65
Chmp7Q8R1T1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC25.38■■□□□ 1.65
Chmp7Q8R1T1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Chmp7Q8R1T1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC25.38■■□□□ 1.65
Chmp7Q8R1T1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Chmp7Q8R1T1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Chmp7Q8R1T1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC25.37■■□□□ 1.65
Chmp7Q8R1T1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Chmp7Q8R1T1 Ap3s1-204ENSMUST00000225520 957 ntBASIC25.37■■□□□ 1.65
Chmp7Q8R1T1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Chmp7Q8R1T1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Chmp7Q8R1T1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Chmp7Q8R1T1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Chmp7Q8R1T1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Chmp7Q8R1T1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Chmp7Q8R1T1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Chmp7Q8R1T1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Chmp7Q8R1T1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Chmp7Q8R1T1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Chmp7Q8R1T1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Chmp7Q8R1T1 Gm7514-201ENSMUST00000209475 934 ntBASIC25.35■■□□□ 1.65
Chmp7Q8R1T1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC25.35■■□□□ 1.65
Chmp7Q8R1T1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC25.35■■□□□ 1.65
Chmp7Q8R1T1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Chmp7Q8R1T1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Chmp7Q8R1T1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Chmp7Q8R1T1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Chmp7Q8R1T1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Chmp7Q8R1T1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC25.34■■□□□ 1.65
Chmp7Q8R1T1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Chmp7Q8R1T1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Chmp7Q8R1T1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Chmp7Q8R1T1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Chmp7Q8R1T1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Chmp7Q8R1T1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Chmp7Q8R1T1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Chmp7Q8R1T1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Chmp7Q8R1T1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
Chmp7Q8R1T1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC25.34■■□□□ 1.65
Chmp7Q8R1T1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Chmp7Q8R1T1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC25.33■■□□□ 1.65
Chmp7Q8R1T1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Chmp7Q8R1T1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.64
Chmp7Q8R1T1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Chmp7Q8R1T1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Chmp7Q8R1T1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Chmp7Q8R1T1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Chmp7Q8R1T1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Chmp7Q8R1T1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Chmp7Q8R1T1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
Chmp7Q8R1T1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Chmp7Q8R1T1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Chmp7Q8R1T1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Chmp7Q8R1T1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Chmp7Q8R1T1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC25.31■■□□□ 1.64
Chmp7Q8R1T1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
Chmp7Q8R1T1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Chmp7Q8R1T1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC25.31■■□□□ 1.64
Chmp7Q8R1T1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Chmp7Q8R1T1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Chmp7Q8R1T1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Chmp7Q8R1T1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Chmp7Q8R1T1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Chmp7Q8R1T1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC25.29■■□□□ 1.64
Chmp7Q8R1T1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Chmp7Q8R1T1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Chmp7Q8R1T1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC25.29■■□□□ 1.64
Chmp7Q8R1T1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Chmp7Q8R1T1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC25.29■■□□□ 1.64
Chmp7Q8R1T1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Chmp7Q8R1T1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Chmp7Q8R1T1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Chmp7Q8R1T1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Chmp7Q8R1T1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
Chmp7Q8R1T1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Chmp7Q8R1T1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Chmp7Q8R1T1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC25.28■■□□□ 1.64
Chmp7Q8R1T1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Chmp7Q8R1T1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Chmp7Q8R1T1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Chmp7Q8R1T1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Chmp7Q8R1T1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
Chmp7Q8R1T1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Chmp7Q8R1T1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Chmp7Q8R1T1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC25.27■■□□□ 1.64
Chmp7Q8R1T1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Chmp7Q8R1T1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Chmp7Q8R1T1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Chmp7Q8R1T1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Chmp7Q8R1T1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Chmp7Q8R1T1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Chmp7Q8R1T1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Chmp7Q8R1T1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC25.26■■□□□ 1.63
Chmp7Q8R1T1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC25.26■■□□□ 1.63
Chmp7Q8R1T1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Chmp7Q8R1T1 Gm12504-201ENSMUST00000120860 2231 ntBASIC25.26■■□□□ 1.63
Chmp7Q8R1T1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC25.26■■□□□ 1.63
Chmp7Q8R1T1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Chmp7Q8R1T1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms