Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Zcchc9Q8R1J3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Zcchc9Q8R1J3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Zcchc9Q8R1J3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Zcchc9Q8R1J3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.66■□□□□ 0.74
Zcchc9Q8R1J3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Zcchc9Q8R1J3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Zcchc9Q8R1J3 Gm18671-201ENSMUST00000214826 683 ntBASIC19.66■□□□□ 0.74
Zcchc9Q8R1J3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Zcchc9Q8R1J3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Zcchc9Q8R1J3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Zcchc9Q8R1J3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Zcchc9Q8R1J3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Zcchc9Q8R1J3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.66■□□□□ 0.74
Zcchc9Q8R1J3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Zcchc9Q8R1J3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
Zcchc9Q8R1J3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Zcchc9Q8R1J3 Gm37179-201ENSMUST00000194862 823 ntBASIC19.65■□□□□ 0.74
Zcchc9Q8R1J3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Zcchc9Q8R1J3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Zcchc9Q8R1J3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Zcchc9Q8R1J3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
Zcchc9Q8R1J3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Zcchc9Q8R1J3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Zcchc9Q8R1J3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Zcchc9Q8R1J3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Zcchc9Q8R1J3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Zcchc9Q8R1J3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Zcchc9Q8R1J3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Zcchc9Q8R1J3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Zcchc9Q8R1J3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Zcchc9Q8R1J3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Zcchc9Q8R1J3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Zcchc9Q8R1J3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Zcchc9Q8R1J3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Zcchc9Q8R1J3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Zcchc9Q8R1J3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Zcchc9Q8R1J3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Zcchc9Q8R1J3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Zcchc9Q8R1J3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Zcchc9Q8R1J3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.63■□□□□ 0.73
Zcchc9Q8R1J3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Zcchc9Q8R1J3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Zcchc9Q8R1J3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Zcchc9Q8R1J3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Zcchc9Q8R1J3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Zcchc9Q8R1J3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Zcchc9Q8R1J3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Zcchc9Q8R1J3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Zcchc9Q8R1J3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Zcchc9Q8R1J3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Zcchc9Q8R1J3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Zcchc9Q8R1J3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Zcchc9Q8R1J3 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.62■□□□□ 0.73
Zcchc9Q8R1J3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Zcchc9Q8R1J3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.62■□□□□ 0.73
Zcchc9Q8R1J3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Zcchc9Q8R1J3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Zcchc9Q8R1J3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Zcchc9Q8R1J3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Zcchc9Q8R1J3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Zcchc9Q8R1J3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Zcchc9Q8R1J3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Zcchc9Q8R1J3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Zcchc9Q8R1J3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Zcchc9Q8R1J3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Zcchc9Q8R1J3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Zcchc9Q8R1J3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Zcchc9Q8R1J3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Zcchc9Q8R1J3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.61■□□□□ 0.73
Zcchc9Q8R1J3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Zcchc9Q8R1J3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Zcchc9Q8R1J3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Zcchc9Q8R1J3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Zcchc9Q8R1J3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Zcchc9Q8R1J3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Zcchc9Q8R1J3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Zcchc9Q8R1J3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Zcchc9Q8R1J3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Zcchc9Q8R1J3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.6■□□□□ 0.73
Zcchc9Q8R1J3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Zcchc9Q8R1J3 Gm11421-201ENSMUST00000122124 294 ntBASIC19.6■□□□□ 0.73
Zcchc9Q8R1J3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Zcchc9Q8R1J3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Zcchc9Q8R1J3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Zcchc9Q8R1J3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Zcchc9Q8R1J3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.59■□□□□ 0.73
Zcchc9Q8R1J3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Zcchc9Q8R1J3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Zcchc9Q8R1J3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Zcchc9Q8R1J3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Zcchc9Q8R1J3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.58■□□□□ 0.73
Zcchc9Q8R1J3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Zcchc9Q8R1J3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.58■□□□□ 0.72
Zcchc9Q8R1J3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Zcchc9Q8R1J3 Gm10033-202ENSMUST00000211874 928 ntBASIC19.58■□□□□ 0.72
Zcchc9Q8R1J3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Zcchc9Q8R1J3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Zcchc9Q8R1J3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Zcchc9Q8R1J3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms