Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rpp40Q8R1F9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rpp40Q8R1F9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rpp40Q8R1F9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Rpp40Q8R1F9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpp40Q8R1F9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpp40Q8R1F9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpp40Q8R1F9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rpp40Q8R1F9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.23■□□□□ 0.99
Rpp40Q8R1F9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.23■□□□□ 0.99
Rpp40Q8R1F9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpp40Q8R1F9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rpp40Q8R1F9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpp40Q8R1F9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpp40Q8R1F9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Rpp40Q8R1F9 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.21■□□□□ 0.99
Rpp40Q8R1F9 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.21■□□□□ 0.99
Rpp40Q8R1F9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpp40Q8R1F9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Rpp40Q8R1F9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Rpp40Q8R1F9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpp40Q8R1F9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpp40Q8R1F9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.2■□□□□ 0.98
Rpp40Q8R1F9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpp40Q8R1F9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rpp40Q8R1F9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
Rpp40Q8R1F9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpp40Q8R1F9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpp40Q8R1F9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpp40Q8R1F9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rpp40Q8R1F9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpp40Q8R1F9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rpp40Q8R1F9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Rpp40Q8R1F9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.18■□□□□ 0.98
Rpp40Q8R1F9 Gm11421-201ENSMUST00000122124 294 ntBASIC21.18■□□□□ 0.98
Rpp40Q8R1F9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpp40Q8R1F9 Gm43060-201ENSMUST00000200621 289 ntBASIC21.18■□□□□ 0.98
Rpp40Q8R1F9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp40Q8R1F9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp40Q8R1F9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Rpp40Q8R1F9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp40Q8R1F9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp40Q8R1F9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp40Q8R1F9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp40Q8R1F9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp40Q8R1F9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rpp40Q8R1F9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpp40Q8R1F9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
Rpp40Q8R1F9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rpp40Q8R1F9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpp40Q8R1F9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Rpp40Q8R1F9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Rpp40Q8R1F9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Rpp40Q8R1F9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Rpp40Q8R1F9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Rpp40Q8R1F9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.14■□□□□ 0.98
Rpp40Q8R1F9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rpp40Q8R1F9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rpp40Q8R1F9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.14■□□□□ 0.97
Rpp40Q8R1F9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpp40Q8R1F9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpp40Q8R1F9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpp40Q8R1F9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms