Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rpp40Q8R1F9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rpp40Q8R1F9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rpp40Q8R1F9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Rpp40Q8R1F9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpp40Q8R1F9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpp40Q8R1F9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpp40Q8R1F9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rpp40Q8R1F9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.23■□□□□ 0.99
Rpp40Q8R1F9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.23■□□□□ 0.99
Rpp40Q8R1F9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpp40Q8R1F9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rpp40Q8R1F9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpp40Q8R1F9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpp40Q8R1F9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpp40Q8R1F9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Rpp40Q8R1F9 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.21■□□□□ 0.99
Rpp40Q8R1F9 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.21■□□□□ 0.99
Rpp40Q8R1F9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpp40Q8R1F9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Rpp40Q8R1F9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Rpp40Q8R1F9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpp40Q8R1F9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpp40Q8R1F9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.2■□□□□ 0.98
Rpp40Q8R1F9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpp40Q8R1F9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rpp40Q8R1F9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
Rpp40Q8R1F9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpp40Q8R1F9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpp40Q8R1F9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpp40Q8R1F9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rpp40Q8R1F9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpp40Q8R1F9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rpp40Q8R1F9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Rpp40Q8R1F9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.18■□□□□ 0.98
Rpp40Q8R1F9 Gm11421-201ENSMUST00000122124 294 ntBASIC21.18■□□□□ 0.98
Rpp40Q8R1F9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpp40Q8R1F9 Gm43060-201ENSMUST00000200621 289 ntBASIC21.18■□□□□ 0.98
Rpp40Q8R1F9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp40Q8R1F9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp40Q8R1F9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Rpp40Q8R1F9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp40Q8R1F9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp40Q8R1F9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp40Q8R1F9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp40Q8R1F9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp40Q8R1F9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rpp40Q8R1F9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpp40Q8R1F9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
Rpp40Q8R1F9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rpp40Q8R1F9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpp40Q8R1F9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Rpp40Q8R1F9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Rpp40Q8R1F9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Rpp40Q8R1F9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Rpp40Q8R1F9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.15■□□□□ 0.98
Rpp40Q8R1F9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Rpp40Q8R1F9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.14■□□□□ 0.98
Rpp40Q8R1F9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rpp40Q8R1F9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rpp40Q8R1F9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.14■□□□□ 0.97
Rpp40Q8R1F9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpp40Q8R1F9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpp40Q8R1F9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpp40Q8R1F9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.13■□□□□ 0.97
Rpp40Q8R1F9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms