Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.31■■□□□ 1
Vopp1Q8R1C3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Vopp1Q8R1C3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vopp1Q8R1C3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vopp1Q8R1C3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Vopp1Q8R1C3 Gm13234-201ENSMUST00000120010 747 ntBASIC21.3■■□□□ 1
Vopp1Q8R1C3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Vopp1Q8R1C3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.3■■□□□ 1
Vopp1Q8R1C3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Vopp1Q8R1C3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vopp1Q8R1C3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.3■■□□□ 1
Vopp1Q8R1C3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vopp1Q8R1C3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.3■■□□□ 1
Vopp1Q8R1C3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vopp1Q8R1C3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Vopp1Q8R1C3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vopp1Q8R1C3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vopp1Q8R1C3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Vopp1Q8R1C3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vopp1Q8R1C3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vopp1Q8R1C3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vopp1Q8R1C3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Vopp1Q8R1C3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vopp1Q8R1C3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vopp1Q8R1C3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vopp1Q8R1C3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vopp1Q8R1C3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.29■■□□□ 1
Vopp1Q8R1C3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vopp1Q8R1C3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vopp1Q8R1C3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vopp1Q8R1C3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Vopp1Q8R1C3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vopp1Q8R1C3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.28■■□□□ 1
Vopp1Q8R1C3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vopp1Q8R1C3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.27■■□□□ 1
Vopp1Q8R1C3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.27■■□□□ 1
Vopp1Q8R1C3 Gm9988-201ENSMUST00000069786 435 ntBASIC21.27■■□□□ 1
Vopp1Q8R1C3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.27■■□□□ 1
Vopp1Q8R1C3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Vopp1Q8R1C3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.27■□□□□ 0.99
Vopp1Q8R1C3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Vopp1Q8R1C3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Vopp1Q8R1C3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vopp1Q8R1C3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vopp1Q8R1C3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vopp1Q8R1C3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vopp1Q8R1C3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Vopp1Q8R1C3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vopp1Q8R1C3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vopp1Q8R1C3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vopp1Q8R1C3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vopp1Q8R1C3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Vopp1Q8R1C3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vopp1Q8R1C3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vopp1Q8R1C3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vopp1Q8R1C3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vopp1Q8R1C3 Gm42778-201ENSMUST00000199644 553 ntBASIC21.24■□□□□ 0.99
Vopp1Q8R1C3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vopp1Q8R1C3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vopp1Q8R1C3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Vopp1Q8R1C3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Vopp1Q8R1C3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.24■□□□□ 0.99
Vopp1Q8R1C3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vopp1Q8R1C3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Vopp1Q8R1C3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vopp1Q8R1C3 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.23■□□□□ 0.99
Vopp1Q8R1C3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.23■□□□□ 0.99
Vopp1Q8R1C3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.23■□□□□ 0.99
Vopp1Q8R1C3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.23■□□□□ 0.99
Vopp1Q8R1C3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.23■□□□□ 0.99
Vopp1Q8R1C3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Vopp1Q8R1C3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vopp1Q8R1C3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vopp1Q8R1C3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vopp1Q8R1C3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Vopp1Q8R1C3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Vopp1Q8R1C3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Vopp1Q8R1C3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vopp1Q8R1C3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vopp1Q8R1C3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vopp1Q8R1C3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vopp1Q8R1C3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vopp1Q8R1C3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Vopp1Q8R1C3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.22■□□□□ 0.99
Vopp1Q8R1C3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.22■□□□□ 0.99
Vopp1Q8R1C3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vopp1Q8R1C3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vopp1Q8R1C3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vopp1Q8R1C3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vopp1Q8R1C3 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.21■□□□□ 0.99
Vopp1Q8R1C3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Vopp1Q8R1C3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.21■□□□□ 0.99
Vopp1Q8R1C3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
Vopp1Q8R1C3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Vopp1Q8R1C3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vopp1Q8R1C3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Vopp1Q8R1C3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.21■□□□□ 0.99
Vopp1Q8R1C3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vopp1Q8R1C3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vopp1Q8R1C3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms