Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnot6Q8K3P5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cnot6Q8K3P5 Etf1-202ENSMUST00000180351 108 ntBASIC19.28■□□□□ 0.68
Cnot6Q8K3P5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnot6Q8K3P5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cnot6Q8K3P5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnot6Q8K3P5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnot6Q8K3P5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cnot6Q8K3P5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnot6Q8K3P5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cnot6Q8K3P5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cnot6Q8K3P5 Gm45102-201ENSMUST00000207427 857 ntBASIC19.27■□□□□ 0.68
Cnot6Q8K3P5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cnot6Q8K3P5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cnot6Q8K3P5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Cnot6Q8K3P5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.26■□□□□ 0.67
Cnot6Q8K3P5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.26■□□□□ 0.67
Cnot6Q8K3P5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.26■□□□□ 0.67
Cnot6Q8K3P5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cnot6Q8K3P5 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cnot6Q8K3P5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.26■□□□□ 0.67
Cnot6Q8K3P5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cnot6Q8K3P5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cnot6Q8K3P5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cnot6Q8K3P5 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cnot6Q8K3P5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cnot6Q8K3P5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cnot6Q8K3P5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cnot6Q8K3P5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cnot6Q8K3P5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cnot6Q8K3P5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.25■□□□□ 0.67
Cnot6Q8K3P5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cnot6Q8K3P5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cnot6Q8K3P5 Gm7417-201ENSMUST00000192950 473 ntBASIC19.25■□□□□ 0.67
Cnot6Q8K3P5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cnot6Q8K3P5 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cnot6Q8K3P5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cnot6Q8K3P5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cnot6Q8K3P5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Cnot6Q8K3P5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cnot6Q8K3P5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cnot6Q8K3P5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cnot6Q8K3P5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cnot6Q8K3P5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.23■□□□□ 0.67
Cnot6Q8K3P5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.23■□□□□ 0.67
Cnot6Q8K3P5 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.23■□□□□ 0.67
Cnot6Q8K3P5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.23■□□□□ 0.67
Cnot6Q8K3P5 Rps24-207ENSMUST00000224568 714 ntBASIC19.23■□□□□ 0.67
Cnot6Q8K3P5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.23■□□□□ 0.67
Cnot6Q8K3P5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cnot6Q8K3P5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cnot6Q8K3P5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.23■□□□□ 0.67
Cnot6Q8K3P5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.23■□□□□ 0.67
Cnot6Q8K3P5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cnot6Q8K3P5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cnot6Q8K3P5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.22■□□□□ 0.67
Cnot6Q8K3P5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cnot6Q8K3P5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cnot6Q8K3P5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cnot6Q8K3P5 Gm14117-201ENSMUST00000122417 843 ntBASIC19.22■□□□□ 0.67
Cnot6Q8K3P5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.22■□□□□ 0.67
Cnot6Q8K3P5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.22■□□□□ 0.67
Cnot6Q8K3P5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cnot6Q8K3P5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cnot6Q8K3P5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cnot6Q8K3P5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cnot6Q8K3P5 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cnot6Q8K3P5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnot6Q8K3P5 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnot6Q8K3P5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cnot6Q8K3P5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnot6Q8K3P5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cnot6Q8K3P5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnot6Q8K3P5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnot6Q8K3P5 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cnot6Q8K3P5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnot6Q8K3P5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnot6Q8K3P5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnot6Q8K3P5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cnot6Q8K3P5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cnot6Q8K3P5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnot6Q8K3P5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnot6Q8K3P5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Cnot6Q8K3P5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.2■□□□□ 0.66
Cnot6Q8K3P5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnot6Q8K3P5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnot6Q8K3P5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cnot6Q8K3P5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnot6Q8K3P5 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnot6Q8K3P5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cnot6Q8K3P5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnot6Q8K3P5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnot6Q8K3P5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnot6Q8K3P5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnot6Q8K3P5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.18■□□□□ 0.66
Cnot6Q8K3P5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.18■□□□□ 0.66
Cnot6Q8K3P5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnot6Q8K3P5 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnot6Q8K3P5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cnot6Q8K3P5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms