Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cchcr1Q8K2I2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Cchcr1Q8K2I2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cchcr1Q8K2I2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC23.35■■□□□ 1.33
Cchcr1Q8K2I2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cchcr1Q8K2I2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cchcr1Q8K2I2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cchcr1Q8K2I2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cchcr1Q8K2I2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cchcr1Q8K2I2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Cchcr1Q8K2I2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC23.34■■□□□ 1.33
Cchcr1Q8K2I2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Cchcr1Q8K2I2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Cchcr1Q8K2I2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cchcr1Q8K2I2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cchcr1Q8K2I2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Cchcr1Q8K2I2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cchcr1Q8K2I2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cchcr1Q8K2I2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cchcr1Q8K2I2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cchcr1Q8K2I2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cchcr1Q8K2I2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cchcr1Q8K2I2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cchcr1Q8K2I2 Gm45102-201ENSMUST00000207427 857 ntBASIC23.32■■□□□ 1.32
Cchcr1Q8K2I2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC23.32■■□□□ 1.32
Cchcr1Q8K2I2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cchcr1Q8K2I2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
Cchcr1Q8K2I2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cchcr1Q8K2I2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cchcr1Q8K2I2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cchcr1Q8K2I2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cchcr1Q8K2I2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Cchcr1Q8K2I2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cchcr1Q8K2I2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC23.31■■□□□ 1.32
Cchcr1Q8K2I2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cchcr1Q8K2I2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cchcr1Q8K2I2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC23.31■■□□□ 1.32
Cchcr1Q8K2I2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cchcr1Q8K2I2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cchcr1Q8K2I2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC23.3■■□□□ 1.32
Cchcr1Q8K2I2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Cchcr1Q8K2I2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Cchcr1Q8K2I2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cchcr1Q8K2I2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cchcr1Q8K2I2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC23.29■■□□□ 1.32
Cchcr1Q8K2I2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cchcr1Q8K2I2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cchcr1Q8K2I2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cchcr1Q8K2I2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cchcr1Q8K2I2 Gm43545-201ENSMUST00000196765 2779 ntBASIC23.29■■□□□ 1.32
Cchcr1Q8K2I2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cchcr1Q8K2I2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC23.28■■□□□ 1.32
Cchcr1Q8K2I2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC23.28■■□□□ 1.32
Cchcr1Q8K2I2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cchcr1Q8K2I2 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.28■■□□□ 1.32
Cchcr1Q8K2I2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cchcr1Q8K2I2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cchcr1Q8K2I2 Gm43759-201ENSMUST00000196925 1261 ntBASIC23.28■■□□□ 1.32
Cchcr1Q8K2I2 Rps24-207ENSMUST00000224568 714 ntBASIC23.28■■□□□ 1.32
Cchcr1Q8K2I2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cchcr1Q8K2I2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cchcr1Q8K2I2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC23.27■■□□□ 1.32
Cchcr1Q8K2I2 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.27■■□□□ 1.32
Cchcr1Q8K2I2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC23.27■■□□□ 1.32
Cchcr1Q8K2I2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Cchcr1Q8K2I2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cchcr1Q8K2I2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cchcr1Q8K2I2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cchcr1Q8K2I2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cchcr1Q8K2I2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Cchcr1Q8K2I2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Cchcr1Q8K2I2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC23.26■■□□□ 1.31
Cchcr1Q8K2I2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cchcr1Q8K2I2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cchcr1Q8K2I2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Cchcr1Q8K2I2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC23.25■■□□□ 1.31
Cchcr1Q8K2I2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
Cchcr1Q8K2I2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cchcr1Q8K2I2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cchcr1Q8K2I2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.25■■□□□ 1.31
Cchcr1Q8K2I2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cchcr1Q8K2I2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC23.25■■□□□ 1.31
Cchcr1Q8K2I2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Cchcr1Q8K2I2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cchcr1Q8K2I2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cchcr1Q8K2I2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Cchcr1Q8K2I2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cchcr1Q8K2I2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cchcr1Q8K2I2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC23.24■■□□□ 1.31
Cchcr1Q8K2I2 Gm14117-201ENSMUST00000122417 843 ntBASIC23.24■■□□□ 1.31
Cchcr1Q8K2I2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cchcr1Q8K2I2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cchcr1Q8K2I2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cchcr1Q8K2I2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cchcr1Q8K2I2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cchcr1Q8K2I2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Cchcr1Q8K2I2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.23■■□□□ 1.31
Cchcr1Q8K2I2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cchcr1Q8K2I2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cchcr1Q8K2I2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms