Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim68Q8K243 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.31■■□□□ 1
Trim68Q8K243 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.31■■□□□ 1
Trim68Q8K243 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim68Q8K243 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim68Q8K243 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim68Q8K243 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim68Q8K243 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim68Q8K243 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim68Q8K243 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.3■■□□□ 1
Trim68Q8K243 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim68Q8K243 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim68Q8K243 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim68Q8K243 Gm10602-201ENSMUST00000098239 609 ntBASIC21.3■■□□□ 1
Trim68Q8K243 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Trim68Q8K243 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim68Q8K243 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim68Q8K243 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.29■■□□□ 1
Trim68Q8K243 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.29■■□□□ 1
Trim68Q8K243 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trim68Q8K243 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.29■■□□□ 1
Trim68Q8K243 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trim68Q8K243 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.29■■□□□ 1
Trim68Q8K243 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Trim68Q8K243 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim68Q8K243 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim68Q8K243 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim68Q8K243 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim68Q8K243 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim68Q8K243 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Trim68Q8K243 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim68Q8K243 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.28■■□□□ 1
Trim68Q8K243 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim68Q8K243 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.28■■□□□ 1
Trim68Q8K243 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim68Q8K243 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Trim68Q8K243 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Trim68Q8K243 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim68Q8K243 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Trim68Q8K243 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Trim68Q8K243 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.27■■□□□ 1
Trim68Q8K243 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim68Q8K243 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim68Q8K243 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Trim68Q8K243 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.27■■□□□ 1
Trim68Q8K243 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim68Q8K243 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim68Q8K243 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim68Q8K243 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim68Q8K243 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim68Q8K243 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Trim68Q8K243 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim68Q8K243 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Trim68Q8K243 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Trim68Q8K243 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Trim68Q8K243 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim68Q8K243 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.26■□□□□ 0.99
Trim68Q8K243 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim68Q8K243 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim68Q8K243 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.26■□□□□ 0.99
Trim68Q8K243 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim68Q8K243 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim68Q8K243 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim68Q8K243 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.25■□□□□ 0.99
Trim68Q8K243 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Trim68Q8K243 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Trim68Q8K243 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim68Q8K243 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim68Q8K243 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim68Q8K243 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim68Q8K243 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim68Q8K243 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim68Q8K243 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim68Q8K243 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim68Q8K243 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.24■□□□□ 0.99
Trim68Q8K243 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim68Q8K243 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.24■□□□□ 0.99
Trim68Q8K243 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.24■□□□□ 0.99
Trim68Q8K243 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim68Q8K243 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim68Q8K243 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim68Q8K243 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim68Q8K243 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim68Q8K243 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.23■□□□□ 0.99
Trim68Q8K243 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim68Q8K243 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim68Q8K243 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Trim68Q8K243 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim68Q8K243 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim68Q8K243 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Trim68Q8K243 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim68Q8K243 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim68Q8K243 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Trim68Q8K243 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim68Q8K243 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.21■□□□□ 0.99
Trim68Q8K243 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim68Q8K243 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim68Q8K243 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim68Q8K243 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim68Q8K243 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms