Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmgcs1Q8JZK9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.83■□□□□ 0.6
Hmgcs1Q8JZK9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.83■□□□□ 0.6
Hmgcs1Q8JZK9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Hmgcs1Q8JZK9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Hmgcs1Q8JZK9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Hmgcs1Q8JZK9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmgcs1Q8JZK9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Hmgcs1Q8JZK9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmgcs1Q8JZK9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgcs1Q8JZK9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgcs1Q8JZK9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgcs1Q8JZK9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
Hmgcs1Q8JZK9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.82■□□□□ 0.6
Hmgcs1Q8JZK9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgcs1Q8JZK9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgcs1Q8JZK9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Hmgcs1Q8JZK9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Hmgcs1Q8JZK9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgcs1Q8JZK9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgcs1Q8JZK9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgcs1Q8JZK9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgcs1Q8JZK9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgcs1Q8JZK9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgcs1Q8JZK9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgcs1Q8JZK9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgcs1Q8JZK9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgcs1Q8JZK9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgcs1Q8JZK9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgcs1Q8JZK9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgcs1Q8JZK9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgcs1Q8JZK9 Gm22238-201ENSMUST00000175222 88 ntBASIC18.8■□□□□ 0.6
Hmgcs1Q8JZK9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.8■□□□□ 0.6
Hmgcs1Q8JZK9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgcs1Q8JZK9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgcs1Q8JZK9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Hmgcs1Q8JZK9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgcs1Q8JZK9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgcs1Q8JZK9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hmgcs1Q8JZK9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.79■□□□□ 0.6
Hmgcs1Q8JZK9 Rps24-207ENSMUST00000224568 714 ntBASIC18.79■□□□□ 0.6
Hmgcs1Q8JZK9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hmgcs1Q8JZK9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgcs1Q8JZK9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.79■□□□□ 0.6
Hmgcs1Q8JZK9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgcs1Q8JZK9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgcs1Q8JZK9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgcs1Q8JZK9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Hmgcs1Q8JZK9 Gm45102-201ENSMUST00000207427 857 ntBASIC18.78■□□□□ 0.6
Hmgcs1Q8JZK9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgcs1Q8JZK9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgcs1Q8JZK9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgcs1Q8JZK9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgcs1Q8JZK9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgcs1Q8JZK9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgcs1Q8JZK9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgcs1Q8JZK9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.77■□□□□ 0.6
Hmgcs1Q8JZK9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgcs1Q8JZK9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgcs1Q8JZK9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgcs1Q8JZK9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgcs1Q8JZK9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgcs1Q8JZK9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Hmgcs1Q8JZK9 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.77■□□□□ 0.6
Hmgcs1Q8JZK9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hmgcs1Q8JZK9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hmgcs1Q8JZK9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Hmgcs1Q8JZK9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgcs1Q8JZK9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgcs1Q8JZK9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.76■□□□□ 0.59
Hmgcs1Q8JZK9 Gm14117-201ENSMUST00000122417 843 ntBASIC18.76■□□□□ 0.59
Hmgcs1Q8JZK9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgcs1Q8JZK9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.76■□□□□ 0.59
Hmgcs1Q8JZK9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgcs1Q8JZK9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgcs1Q8JZK9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgcs1Q8JZK9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgcs1Q8JZK9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgcs1Q8JZK9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Hmgcs1Q8JZK9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.75■□□□□ 0.59
Hmgcs1Q8JZK9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.75■□□□□ 0.59
Hmgcs1Q8JZK9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
Hmgcs1Q8JZK9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Hmgcs1Q8JZK9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.74■□□□□ 0.59
Hmgcs1Q8JZK9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Hmgcs1Q8JZK9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgcs1Q8JZK9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgcs1Q8JZK9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgcs1Q8JZK9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgcs1Q8JZK9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.74■□□□□ 0.59
Hmgcs1Q8JZK9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.74■□□□□ 0.59
Hmgcs1Q8JZK9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Hmgcs1Q8JZK9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgcs1Q8JZK9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgcs1Q8JZK9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgcs1Q8JZK9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Hmgcs1Q8JZK9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgcs1Q8JZK9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgcs1Q8JZK9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.73■□□□□ 0.59
Hmgcs1Q8JZK9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms