Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Slc46a2Q8CA03 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc46a2Q8CA03 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc46a2Q8CA03 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.94■□□□□ 0.62
Slc46a2Q8CA03 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc46a2Q8CA03 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc46a2Q8CA03 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc46a2Q8CA03 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc46a2Q8CA03 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slc46a2Q8CA03 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Slc46a2Q8CA03 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Slc46a2Q8CA03 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.93■□□□□ 0.62
Slc46a2Q8CA03 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc46a2Q8CA03 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc46a2Q8CA03 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc46a2Q8CA03 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Slc46a2Q8CA03 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc46a2Q8CA03 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc46a2Q8CA03 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.93■□□□□ 0.62
Slc46a2Q8CA03 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.93■□□□□ 0.62
Slc46a2Q8CA03 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc46a2Q8CA03 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Slc46a2Q8CA03 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc46a2Q8CA03 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc46a2Q8CA03 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Slc46a2Q8CA03 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Slc46a2Q8CA03 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Slc46a2Q8CA03 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.92■□□□□ 0.62
Slc46a2Q8CA03 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc46a2Q8CA03 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc46a2Q8CA03 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Slc46a2Q8CA03 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.92■□□□□ 0.62
Slc46a2Q8CA03 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc46a2Q8CA03 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.92■□□□□ 0.62
Slc46a2Q8CA03 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Slc46a2Q8CA03 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc46a2Q8CA03 Mir6236-201ENSMUST00000184437 123 ntBASIC18.91■□□□□ 0.62
Slc46a2Q8CA03 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc46a2Q8CA03 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc46a2Q8CA03 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Slc46a2Q8CA03 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Slc46a2Q8CA03 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Slc46a2Q8CA03 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Slc46a2Q8CA03 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.9■□□□□ 0.62
Slc46a2Q8CA03 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc46a2Q8CA03 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.9■□□□□ 0.62
Slc46a2Q8CA03 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.9■□□□□ 0.62
Slc46a2Q8CA03 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Slc46a2Q8CA03 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Slc46a2Q8CA03 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc46a2Q8CA03 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Slc46a2Q8CA03 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc46a2Q8CA03 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc46a2Q8CA03 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Slc46a2Q8CA03 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc46a2Q8CA03 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc46a2Q8CA03 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc46a2Q8CA03 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Slc46a2Q8CA03 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.89■□□□□ 0.61
Slc46a2Q8CA03 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.89■□□□□ 0.61
Slc46a2Q8CA03 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc46a2Q8CA03 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc46a2Q8CA03 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Slc46a2Q8CA03 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Slc46a2Q8CA03 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc46a2Q8CA03 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc46a2Q8CA03 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc46a2Q8CA03 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc46a2Q8CA03 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc46a2Q8CA03 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.88■□□□□ 0.61
Slc46a2Q8CA03 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Slc46a2Q8CA03 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc46a2Q8CA03 Gm5921-201ENSMUST00000075898 882 ntBASIC18.88■□□□□ 0.61
Slc46a2Q8CA03 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc46a2Q8CA03 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc46a2Q8CA03 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc46a2Q8CA03 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc46a2Q8CA03 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc46a2Q8CA03 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Slc46a2Q8CA03 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc46a2Q8CA03 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc46a2Q8CA03 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc46a2Q8CA03 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc46a2Q8CA03 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.87■□□□□ 0.61
Slc46a2Q8CA03 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc46a2Q8CA03 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc46a2Q8CA03 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc46a2Q8CA03 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc46a2Q8CA03 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc46a2Q8CA03 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Slc46a2Q8CA03 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc46a2Q8CA03 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc46a2Q8CA03 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.86■□□□□ 0.61
Slc46a2Q8CA03 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc46a2Q8CA03 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc46a2Q8CA03 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc46a2Q8CA03 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc46a2Q8CA03 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc46a2Q8CA03 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.85■□□□□ 0.61
Slc46a2Q8CA03 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms