Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC22.76■■□□□ 1.23
Rtp1Q8C8C1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rtp1Q8C8C1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rtp1Q8C8C1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rtp1Q8C8C1 AC135963.1-201ENSMUST00000211640 717 ntBASIC22.75■■□□□ 1.23
Rtp1Q8C8C1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rtp1Q8C8C1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rtp1Q8C8C1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Rtp1Q8C8C1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rtp1Q8C8C1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rtp1Q8C8C1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rtp1Q8C8C1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rtp1Q8C8C1 Gm10812-201ENSMUST00000099864 546 ntBASIC22.74■■□□□ 1.23
Rtp1Q8C8C1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rtp1Q8C8C1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rtp1Q8C8C1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.73■■□□□ 1.23
Rtp1Q8C8C1 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.73■■□□□ 1.23
Rtp1Q8C8C1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rtp1Q8C8C1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC22.73■■□□□ 1.23
Rtp1Q8C8C1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rtp1Q8C8C1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.73■■□□□ 1.23
Rtp1Q8C8C1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rtp1Q8C8C1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Rtp1Q8C8C1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rtp1Q8C8C1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Rtp1Q8C8C1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Rtp1Q8C8C1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rtp1Q8C8C1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rtp1Q8C8C1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Rtp1Q8C8C1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Rtp1Q8C8C1 Mir6982-201ENSMUST00000184354 68 ntBASIC22.72■■□□□ 1.23
Rtp1Q8C8C1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.72■■□□□ 1.23
Rtp1Q8C8C1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC22.72■■□□□ 1.23
Rtp1Q8C8C1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rtp1Q8C8C1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rtp1Q8C8C1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rtp1Q8C8C1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Rtp1Q8C8C1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Rtp1Q8C8C1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC22.71■■□□□ 1.23
Rtp1Q8C8C1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rtp1Q8C8C1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC22.71■■□□□ 1.23
Rtp1Q8C8C1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Rtp1Q8C8C1 Gm20049-201ENSMUST00000219950 730 ntBASIC22.71■■□□□ 1.23
Rtp1Q8C8C1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rtp1Q8C8C1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Rtp1Q8C8C1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rtp1Q8C8C1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.7■■□□□ 1.22
Rtp1Q8C8C1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC22.7■■□□□ 1.22
Rtp1Q8C8C1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC22.7■■□□□ 1.22
Rtp1Q8C8C1 AC135637.1-201ENSMUST00000227750 365 ntBASIC22.7■■□□□ 1.22
Rtp1Q8C8C1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Rtp1Q8C8C1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rtp1Q8C8C1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rtp1Q8C8C1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Rtp1Q8C8C1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rtp1Q8C8C1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rtp1Q8C8C1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rtp1Q8C8C1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Rtp1Q8C8C1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Rtp1Q8C8C1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rtp1Q8C8C1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rtp1Q8C8C1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Rtp1Q8C8C1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC22.69■■□□□ 1.22
Rtp1Q8C8C1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Rtp1Q8C8C1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rtp1Q8C8C1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rtp1Q8C8C1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rtp1Q8C8C1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rtp1Q8C8C1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22.68■■□□□ 1.22
Rtp1Q8C8C1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC22.68■■□□□ 1.22
Rtp1Q8C8C1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rtp1Q8C8C1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rtp1Q8C8C1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rtp1Q8C8C1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtp1Q8C8C1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtp1Q8C8C1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rtp1Q8C8C1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtp1Q8C8C1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Rtp1Q8C8C1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtp1Q8C8C1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtp1Q8C8C1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtp1Q8C8C1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Rtp1Q8C8C1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtp1Q8C8C1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC22.66■■□□□ 1.22
Rtp1Q8C8C1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rtp1Q8C8C1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
Rtp1Q8C8C1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Rtp1Q8C8C1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rtp1Q8C8C1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtp1Q8C8C1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtp1Q8C8C1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC22.65■■□□□ 1.22
Rtp1Q8C8C1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtp1Q8C8C1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtp1Q8C8C1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtp1Q8C8C1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Rtp1Q8C8C1 Gm7290-201ENSMUST00000104990 617 ntBASIC22.64■■□□□ 1.21
Rtp1Q8C8C1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
Rtp1Q8C8C1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC22.64■■□□□ 1.21
Rtp1Q8C8C1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Rtp1Q8C8C1 Gm12918-201ENSMUST00000120234 636 ntBASIC22.64■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms