Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfap54Q8C6S9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfap54Q8C6S9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfap54Q8C6S9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfap54Q8C6S9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cfap54Q8C6S9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfap54Q8C6S9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfap54Q8C6S9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cfap54Q8C6S9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfap54Q8C6S9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfap54Q8C6S9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cfap54Q8C6S9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cfap54Q8C6S9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cfap54Q8C6S9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cfap54Q8C6S9 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.19■□□□□ 0.66
Cfap54Q8C6S9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cfap54Q8C6S9 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.19■□□□□ 0.66
Cfap54Q8C6S9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cfap54Q8C6S9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.18■□□□□ 0.66
Cfap54Q8C6S9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.18■□□□□ 0.66
Cfap54Q8C6S9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.18■□□□□ 0.66
Cfap54Q8C6S9 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.18■□□□□ 0.66
Cfap54Q8C6S9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cfap54Q8C6S9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cfap54Q8C6S9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.17■□□□□ 0.66
Cfap54Q8C6S9 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.17■□□□□ 0.66
Cfap54Q8C6S9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cfap54Q8C6S9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cfap54Q8C6S9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cfap54Q8C6S9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.17■□□□□ 0.66
Cfap54Q8C6S9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.17■□□□□ 0.66
Cfap54Q8C6S9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.17■□□□□ 0.66
Cfap54Q8C6S9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.16■□□□□ 0.66
Cfap54Q8C6S9 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.16■□□□□ 0.66
Cfap54Q8C6S9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cfap54Q8C6S9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cfap54Q8C6S9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cfap54Q8C6S9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cfap54Q8C6S9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cfap54Q8C6S9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cfap54Q8C6S9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cfap54Q8C6S9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.15■□□□□ 0.66
Cfap54Q8C6S9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.15■□□□□ 0.66
Cfap54Q8C6S9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cfap54Q8C6S9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cfap54Q8C6S9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cfap54Q8C6S9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.14■□□□□ 0.66
Cfap54Q8C6S9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cfap54Q8C6S9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cfap54Q8C6S9 Mir6982-201ENSMUST00000184354 68 ntBASIC19.14■□□□□ 0.66
Cfap54Q8C6S9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Cfap54Q8C6S9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cfap54Q8C6S9 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.14■□□□□ 0.65
Cfap54Q8C6S9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.14■□□□□ 0.65
Cfap54Q8C6S9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cfap54Q8C6S9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cfap54Q8C6S9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cfap54Q8C6S9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.14■□□□□ 0.65
Cfap54Q8C6S9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cfap54Q8C6S9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.13■□□□□ 0.65
Cfap54Q8C6S9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cfap54Q8C6S9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.13■□□□□ 0.65
Cfap54Q8C6S9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cfap54Q8C6S9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.13■□□□□ 0.65
Cfap54Q8C6S9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.13■□□□□ 0.65
Cfap54Q8C6S9 Gm26524-201ENSMUST00000192339 390 ntBASIC19.13■□□□□ 0.65
Cfap54Q8C6S9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cfap54Q8C6S9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cfap54Q8C6S9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cfap54Q8C6S9 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.12■□□□□ 0.65
Cfap54Q8C6S9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cfap54Q8C6S9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cfap54Q8C6S9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cfap54Q8C6S9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cfap54Q8C6S9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cfap54Q8C6S9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cfap54Q8C6S9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.12■□□□□ 0.65
Cfap54Q8C6S9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cfap54Q8C6S9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cfap54Q8C6S9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cfap54Q8C6S9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cfap54Q8C6S9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cfap54Q8C6S9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cfap54Q8C6S9 Gm5408-201ENSMUST00000197998 747 ntBASIC19.11■□□□□ 0.65
Cfap54Q8C6S9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cfap54Q8C6S9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cfap54Q8C6S9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cfap54Q8C6S9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cfap54Q8C6S9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.11■□□□□ 0.65
Cfap54Q8C6S9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cfap54Q8C6S9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cfap54Q8C6S9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.11■□□□□ 0.65
Cfap54Q8C6S9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.1■□□□□ 0.65
Cfap54Q8C6S9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.1■□□□□ 0.65
Cfap54Q8C6S9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cfap54Q8C6S9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cfap54Q8C6S9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cfap54Q8C6S9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.1■□□□□ 0.65
Cfap54Q8C6S9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cfap54Q8C6S9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms