Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Fam78aQ8C552 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Fam78aQ8C552 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Fam78aQ8C552 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Fam78aQ8C552 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.08■□□□□ 0.97
Fam78aQ8C552 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Fam78aQ8C552 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Fam78aQ8C552 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Fam78aQ8C552 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Fam78aQ8C552 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Fam78aQ8C552 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.08■□□□□ 0.97
Fam78aQ8C552 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Fam78aQ8C552 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Fam78aQ8C552 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Fam78aQ8C552 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.07■□□□□ 0.96
Fam78aQ8C552 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.07■□□□□ 0.96
Fam78aQ8C552 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.07■□□□□ 0.96
Fam78aQ8C552 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Fam78aQ8C552 Gm10602-201ENSMUST00000098239 609 ntBASIC21.07■□□□□ 0.96
Fam78aQ8C552 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Fam78aQ8C552 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Fam78aQ8C552 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Fam78aQ8C552 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.06■□□□□ 0.96
Fam78aQ8C552 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Fam78aQ8C552 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam78aQ8C552 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam78aQ8C552 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Fam78aQ8C552 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam78aQ8C552 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Fam78aQ8C552 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam78aQ8C552 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fam78aQ8C552 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Fam78aQ8C552 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fam78aQ8C552 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Fam78aQ8C552 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.04■□□□□ 0.96
Fam78aQ8C552 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fam78aQ8C552 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.04■□□□□ 0.96
Fam78aQ8C552 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fam78aQ8C552 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fam78aQ8C552 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fam78aQ8C552 Gm7514-201ENSMUST00000209475 934 ntBASIC21.03■□□□□ 0.96
Fam78aQ8C552 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fam78aQ8C552 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fam78aQ8C552 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fam78aQ8C552 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Fam78aQ8C552 Gm12933-201ENSMUST00000120203 872 ntBASIC21.02■□□□□ 0.96
Fam78aQ8C552 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.02■□□□□ 0.96
Fam78aQ8C552 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Fam78aQ8C552 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.02■□□□□ 0.96
Fam78aQ8C552 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam78aQ8C552 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam78aQ8C552 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam78aQ8C552 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam78aQ8C552 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam78aQ8C552 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Fam78aQ8C552 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Fam78aQ8C552 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.01■□□□□ 0.95
Fam78aQ8C552 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Fam78aQ8C552 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Fam78aQ8C552 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Fam78aQ8C552 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam78aQ8C552 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fam78aQ8C552 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21■□□□□ 0.95
Fam78aQ8C552 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fam78aQ8C552 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21■□□□□ 0.95
Fam78aQ8C552 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fam78aQ8C552 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Fam78aQ8C552 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fam78aQ8C552 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21■□□□□ 0.95
Fam78aQ8C552 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fam78aQ8C552 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fam78aQ8C552 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fam78aQ8C552 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Fam78aQ8C552 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fam78aQ8C552 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Fam78aQ8C552 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Fam78aQ8C552 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.99■□□□□ 0.95
Fam78aQ8C552 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Fam78aQ8C552 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fam78aQ8C552 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.99■□□□□ 0.95
Fam78aQ8C552 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fam78aQ8C552 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fam78aQ8C552 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fam78aQ8C552 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Fam78aQ8C552 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Fam78aQ8C552 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fam78aQ8C552 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fam78aQ8C552 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fam78aQ8C552 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.97■□□□□ 0.95
Fam78aQ8C552 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fam78aQ8C552 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Fam78aQ8C552 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Fam78aQ8C552 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.97■□□□□ 0.95
Fam78aQ8C552 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Fam78aQ8C552 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fam78aQ8C552 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Fam78aQ8C552 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fam78aQ8C552 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fam78aQ8C552 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fam78aQ8C552 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms