Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ptcd1Q8C2E4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ptcd1Q8C2E4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ptcd1Q8C2E4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Ptcd1Q8C2E4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
Ptcd1Q8C2E4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ptcd1Q8C2E4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ptcd1Q8C2E4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC24.39■■□□□ 1.49
Ptcd1Q8C2E4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Ptcd1Q8C2E4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ptcd1Q8C2E4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Ptcd1Q8C2E4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Ptcd1Q8C2E4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC24.39■■□□□ 1.49
Ptcd1Q8C2E4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ptcd1Q8C2E4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ptcd1Q8C2E4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ptcd1Q8C2E4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ptcd1Q8C2E4 Gm14281-201ENSMUST00000121700 1294 ntBASIC24.38■■□□□ 1.49
Ptcd1Q8C2E4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC24.38■■□□□ 1.49
Ptcd1Q8C2E4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ptcd1Q8C2E4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ptcd1Q8C2E4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Ptcd1Q8C2E4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ptcd1Q8C2E4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ptcd1Q8C2E4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ptcd1Q8C2E4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ptcd1Q8C2E4 Gm7514-201ENSMUST00000209475 934 ntBASIC24.37■■□□□ 1.49
Ptcd1Q8C2E4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ptcd1Q8C2E4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC24.36■■□□□ 1.49
Ptcd1Q8C2E4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC24.36■■□□□ 1.49
Ptcd1Q8C2E4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ptcd1Q8C2E4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Ptcd1Q8C2E4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC24.36■■□□□ 1.49
Ptcd1Q8C2E4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC24.36■■□□□ 1.49
Ptcd1Q8C2E4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ptcd1Q8C2E4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ptcd1Q8C2E4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ptcd1Q8C2E4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ptcd1Q8C2E4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC24.36■■□□□ 1.49
Ptcd1Q8C2E4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ptcd1Q8C2E4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ptcd1Q8C2E4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC24.35■■□□□ 1.49
Ptcd1Q8C2E4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ptcd1Q8C2E4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ptcd1Q8C2E4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ptcd1Q8C2E4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ptcd1Q8C2E4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC24.35■■□□□ 1.49
Ptcd1Q8C2E4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Ptcd1Q8C2E4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ptcd1Q8C2E4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ptcd1Q8C2E4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ptcd1Q8C2E4 Gm22240-201ENSMUST00000175225 82 ntBASIC24.34■■□□□ 1.49
Ptcd1Q8C2E4 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Ptcd1Q8C2E4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC24.34■■□□□ 1.49
Ptcd1Q8C2E4 Gm38160-201ENSMUST00000193090 2499 ntBASIC24.34■■□□□ 1.49
Ptcd1Q8C2E4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ptcd1Q8C2E4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC24.33■■□□□ 1.49
Ptcd1Q8C2E4 Mir5133-201ENSMUST00000174955 77 ntBASIC24.33■■□□□ 1.49
Ptcd1Q8C2E4 Ap3s1-204ENSMUST00000225520 957 ntBASIC24.33■■□□□ 1.49
Ptcd1Q8C2E4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ptcd1Q8C2E4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.48
Ptcd1Q8C2E4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ptcd1Q8C2E4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ptcd1Q8C2E4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ptcd1Q8C2E4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
Ptcd1Q8C2E4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC24.32■■□□□ 1.48
Ptcd1Q8C2E4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ptcd1Q8C2E4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ptcd1Q8C2E4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Ptcd1Q8C2E4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ptcd1Q8C2E4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ptcd1Q8C2E4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
Ptcd1Q8C2E4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ptcd1Q8C2E4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Ptcd1Q8C2E4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC24.3■■□□□ 1.48
Ptcd1Q8C2E4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Ptcd1Q8C2E4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ptcd1Q8C2E4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ptcd1Q8C2E4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC24.3■■□□□ 1.48
Ptcd1Q8C2E4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Ptcd1Q8C2E4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ptcd1Q8C2E4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC24.29■■□□□ 1.48
Ptcd1Q8C2E4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ptcd1Q8C2E4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ptcd1Q8C2E4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ptcd1Q8C2E4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC24.29■■□□□ 1.48
Ptcd1Q8C2E4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ptcd1Q8C2E4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC24.29■■□□□ 1.48
Ptcd1Q8C2E4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ptcd1Q8C2E4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ptcd1Q8C2E4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Ptcd1Q8C2E4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ptcd1Q8C2E4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ptcd1Q8C2E4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ptcd1Q8C2E4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ptcd1Q8C2E4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ptcd1Q8C2E4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ptcd1Q8C2E4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Ptcd1Q8C2E4 Gm10252-201ENSMUST00000209541 832 ntBASIC24.28■■□□□ 1.48
Ptcd1Q8C2E4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms