Protein–RNA interactions for Protein: Q8C0J2

Atg16l1, Autophagy-related protein 16-1, mousemouse

Predictions only

Length 607 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg16l1Q8C0J2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atg16l1Q8C0J2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Atg16l1Q8C0J2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Atg16l1Q8C0J2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Atg16l1Q8C0J2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Atg16l1Q8C0J2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Atg16l1Q8C0J2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Atg16l1Q8C0J2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atg16l1Q8C0J2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Atg16l1Q8C0J2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atg16l1Q8C0J2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atg16l1Q8C0J2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.64■□□□□ 0.73
Atg16l1Q8C0J2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.64■□□□□ 0.73
Atg16l1Q8C0J2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atg16l1Q8C0J2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atg16l1Q8C0J2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Atg16l1Q8C0J2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atg16l1Q8C0J2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atg16l1Q8C0J2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Atg16l1Q8C0J2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atg16l1Q8C0J2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atg16l1Q8C0J2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atg16l1Q8C0J2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atg16l1Q8C0J2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atg16l1Q8C0J2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atg16l1Q8C0J2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atg16l1Q8C0J2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atg16l1Q8C0J2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atg16l1Q8C0J2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atg16l1Q8C0J2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atg16l1Q8C0J2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atg16l1Q8C0J2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atg16l1Q8C0J2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atg16l1Q8C0J2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atg16l1Q8C0J2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atg16l1Q8C0J2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atg16l1Q8C0J2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Atg16l1Q8C0J2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Atg16l1Q8C0J2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg16l1Q8C0J2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg16l1Q8C0J2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg16l1Q8C0J2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Atg16l1Q8C0J2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg16l1Q8C0J2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg16l1Q8C0J2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg16l1Q8C0J2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atg16l1Q8C0J2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Atg16l1Q8C0J2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atg16l1Q8C0J2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.6■□□□□ 0.73
Atg16l1Q8C0J2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atg16l1Q8C0J2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Atg16l1Q8C0J2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Atg16l1Q8C0J2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atg16l1Q8C0J2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atg16l1Q8C0J2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atg16l1Q8C0J2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Atg16l1Q8C0J2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.59■□□□□ 0.73
Atg16l1Q8C0J2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.59■□□□□ 0.73
Atg16l1Q8C0J2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Atg16l1Q8C0J2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atg16l1Q8C0J2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atg16l1Q8C0J2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Atg16l1Q8C0J2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Atg16l1Q8C0J2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
Atg16l1Q8C0J2 Gm10399-202ENSMUST00000202768 748 ntBASIC19.58■□□□□ 0.72
Atg16l1Q8C0J2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Atg16l1Q8C0J2 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.58■□□□□ 0.72
Atg16l1Q8C0J2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atg16l1Q8C0J2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atg16l1Q8C0J2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atg16l1Q8C0J2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atg16l1Q8C0J2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Atg16l1Q8C0J2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Atg16l1Q8C0J2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.58■□□□□ 0.72
Atg16l1Q8C0J2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atg16l1Q8C0J2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atg16l1Q8C0J2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Atg16l1Q8C0J2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atg16l1Q8C0J2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atg16l1Q8C0J2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Atg16l1Q8C0J2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Atg16l1Q8C0J2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Atg16l1Q8C0J2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atg16l1Q8C0J2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Atg16l1Q8C0J2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Atg16l1Q8C0J2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atg16l1Q8C0J2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atg16l1Q8C0J2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atg16l1Q8C0J2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Atg16l1Q8C0J2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Atg16l1Q8C0J2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.57■□□□□ 0.72
Atg16l1Q8C0J2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Atg16l1Q8C0J2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Atg16l1Q8C0J2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Atg16l1Q8C0J2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atg16l1Q8C0J2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atg16l1Q8C0J2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atg16l1Q8C0J2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Atg16l1Q8C0J2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.56■□□□□ 0.72
Atg16l1Q8C0J2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms