Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.75■■□□□ 1.07
Fam43aQ8BUP8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Fam43aQ8BUP8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Fam43aQ8BUP8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Fam43aQ8BUP8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Fam43aQ8BUP8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Fam43aQ8BUP8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.74■■□□□ 1.07
Fam43aQ8BUP8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Fam43aQ8BUP8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.74■■□□□ 1.07
Fam43aQ8BUP8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.74■■□□□ 1.07
Fam43aQ8BUP8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.74■■□□□ 1.07
Fam43aQ8BUP8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.74■■□□□ 1.07
Fam43aQ8BUP8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Fam43aQ8BUP8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Fam43aQ8BUP8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Fam43aQ8BUP8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Fam43aQ8BUP8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Fam43aQ8BUP8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Fam43aQ8BUP8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Fam43aQ8BUP8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.73■■□□□ 1.07
Fam43aQ8BUP8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Fam43aQ8BUP8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Fam43aQ8BUP8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Fam43aQ8BUP8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Fam43aQ8BUP8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Fam43aQ8BUP8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Fam43aQ8BUP8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Fam43aQ8BUP8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Fam43aQ8BUP8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.72■■□□□ 1.07
Fam43aQ8BUP8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Fam43aQ8BUP8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Fam43aQ8BUP8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.72■■□□□ 1.07
Fam43aQ8BUP8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.72■■□□□ 1.07
Fam43aQ8BUP8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Fam43aQ8BUP8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Fam43aQ8BUP8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Fam43aQ8BUP8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Fam43aQ8BUP8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.71■■□□□ 1.07
Fam43aQ8BUP8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Fam43aQ8BUP8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Fam43aQ8BUP8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Fam43aQ8BUP8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
Fam43aQ8BUP8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Fam43aQ8BUP8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Fam43aQ8BUP8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Fam43aQ8BUP8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Fam43aQ8BUP8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
Fam43aQ8BUP8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Fam43aQ8BUP8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.7■■□□□ 1.06
Fam43aQ8BUP8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Fam43aQ8BUP8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Fam43aQ8BUP8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Fam43aQ8BUP8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Fam43aQ8BUP8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Fam43aQ8BUP8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.69■■□□□ 1.06
Fam43aQ8BUP8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Fam43aQ8BUP8 Gm6598-201ENSMUST00000202719 2615 ntBASIC21.69■■□□□ 1.06
Fam43aQ8BUP8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Fam43aQ8BUP8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.69■■□□□ 1.06
Fam43aQ8BUP8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.69■■□□□ 1.06
Fam43aQ8BUP8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.69■■□□□ 1.06
Fam43aQ8BUP8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Fam43aQ8BUP8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Fam43aQ8BUP8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.68■■□□□ 1.06
Fam43aQ8BUP8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Fam43aQ8BUP8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Fam43aQ8BUP8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Fam43aQ8BUP8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Fam43aQ8BUP8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Fam43aQ8BUP8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Fam43aQ8BUP8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Fam43aQ8BUP8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Fam43aQ8BUP8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Fam43aQ8BUP8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Fam43aQ8BUP8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Fam43aQ8BUP8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Fam43aQ8BUP8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Fam43aQ8BUP8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Fam43aQ8BUP8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Fam43aQ8BUP8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Fam43aQ8BUP8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
Fam43aQ8BUP8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Fam43aQ8BUP8 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.66■■□□□ 1.06
Fam43aQ8BUP8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Fam43aQ8BUP8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Fam43aQ8BUP8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Fam43aQ8BUP8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Fam43aQ8BUP8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Fam43aQ8BUP8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Fam43aQ8BUP8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Fam43aQ8BUP8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Fam43aQ8BUP8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Fam43aQ8BUP8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.65■■□□□ 1.06
Fam43aQ8BUP8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Fam43aQ8BUP8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Fam43aQ8BUP8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Fam43aQ8BUP8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.65■■□□□ 1.06
Fam43aQ8BUP8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.65■■□□□ 1.06
Fam43aQ8BUP8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.65■■□□□ 1.06
Fam43aQ8BUP8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms