Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.44■□□□□ 0.86
Ccdc40Q8BI79 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc40Q8BI79 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.44■□□□□ 0.86
Ccdc40Q8BI79 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc40Q8BI79 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.44■□□□□ 0.86
Ccdc40Q8BI79 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.44■□□□□ 0.86
Ccdc40Q8BI79 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc40Q8BI79 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc40Q8BI79 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc40Q8BI79 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc40Q8BI79 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc40Q8BI79 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ccdc40Q8BI79 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc40Q8BI79 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc40Q8BI79 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc40Q8BI79 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc40Q8BI79 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.43■□□□□ 0.86
Ccdc40Q8BI79 Mir6236-201ENSMUST00000184437 123 ntBASIC20.43■□□□□ 0.86
Ccdc40Q8BI79 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ccdc40Q8BI79 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ccdc40Q8BI79 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc40Q8BI79 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc40Q8BI79 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.43■□□□□ 0.86
Ccdc40Q8BI79 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc40Q8BI79 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc40Q8BI79 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc40Q8BI79 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc40Q8BI79 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc40Q8BI79 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc40Q8BI79 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc40Q8BI79 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc40Q8BI79 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc40Q8BI79 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.42■□□□□ 0.86
Ccdc40Q8BI79 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc40Q8BI79 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc40Q8BI79 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.42■□□□□ 0.86
Ccdc40Q8BI79 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc40Q8BI79 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc40Q8BI79 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc40Q8BI79 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc40Q8BI79 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc40Q8BI79 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc40Q8BI79 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc40Q8BI79 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc40Q8BI79 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.41■□□□□ 0.86
Ccdc40Q8BI79 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.41■□□□□ 0.86
Ccdc40Q8BI79 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc40Q8BI79 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc40Q8BI79 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Ccdc40Q8BI79 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.41■□□□□ 0.86
Ccdc40Q8BI79 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc40Q8BI79 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.4■□□□□ 0.86
Ccdc40Q8BI79 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc40Q8BI79 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc40Q8BI79 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.39■□□□□ 0.86
Ccdc40Q8BI79 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.39■□□□□ 0.86
Ccdc40Q8BI79 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc40Q8BI79 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc40Q8BI79 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc40Q8BI79 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.39■□□□□ 0.85
Ccdc40Q8BI79 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc40Q8BI79 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc40Q8BI79 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ccdc40Q8BI79 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc40Q8BI79 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc40Q8BI79 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc40Q8BI79 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc40Q8BI79 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc40Q8BI79 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc40Q8BI79 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc40Q8BI79 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc40Q8BI79 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc40Q8BI79 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc40Q8BI79 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc40Q8BI79 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc40Q8BI79 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
Ccdc40Q8BI79 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc40Q8BI79 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc40Q8BI79 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc40Q8BI79 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc40Q8BI79 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc40Q8BI79 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ccdc40Q8BI79 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc40Q8BI79 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc40Q8BI79 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc40Q8BI79 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc40Q8BI79 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc40Q8BI79 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Ccdc40Q8BI79 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc40Q8BI79 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc40Q8BI79 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc40Q8BI79 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc40Q8BI79 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc40Q8BI79 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.36■□□□□ 0.85
Ccdc40Q8BI79 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.36■□□□□ 0.85
Ccdc40Q8BI79 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.36■□□□□ 0.85
Ccdc40Q8BI79 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Ccdc40Q8BI79 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc40Q8BI79 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc40Q8BI79 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms