Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn3bQ8BHK2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn3bQ8BHK2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn3bQ8BHK2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn3bQ8BHK2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.32■□□□□ 0.52
Scn3bQ8BHK2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn3bQ8BHK2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Scn3bQ8BHK2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn3bQ8BHK2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Scn3bQ8BHK2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn3bQ8BHK2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Scn3bQ8BHK2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn3bQ8BHK2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn3bQ8BHK2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Scn3bQ8BHK2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scn3bQ8BHK2 Gm27502-201ENSMUST00000183495 199 ntBASIC18.31■□□□□ 0.52
Scn3bQ8BHK2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.31■□□□□ 0.52
Scn3bQ8BHK2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn3bQ8BHK2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.31■□□□□ 0.52
Scn3bQ8BHK2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn3bQ8BHK2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Scn3bQ8BHK2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn3bQ8BHK2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn3bQ8BHK2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn3bQ8BHK2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scn3bQ8BHK2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn3bQ8BHK2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.3■□□□□ 0.52
Scn3bQ8BHK2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn3bQ8BHK2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn3bQ8BHK2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn3bQ8BHK2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scn3bQ8BHK2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.3■□□□□ 0.52
Scn3bQ8BHK2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.3■□□□□ 0.52
Scn3bQ8BHK2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn3bQ8BHK2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn3bQ8BHK2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn3bQ8BHK2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn3bQ8BHK2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn3bQ8BHK2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn3bQ8BHK2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scn3bQ8BHK2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn3bQ8BHK2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Scn3bQ8BHK2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn3bQ8BHK2 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.29■□□□□ 0.52
Scn3bQ8BHK2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scn3bQ8BHK2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn3bQ8BHK2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn3bQ8BHK2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn3bQ8BHK2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scn3bQ8BHK2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.29■□□□□ 0.52
Scn3bQ8BHK2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn3bQ8BHK2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn3bQ8BHK2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn3bQ8BHK2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn3bQ8BHK2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn3bQ8BHK2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Scn3bQ8BHK2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn3bQ8BHK2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn3bQ8BHK2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn3bQ8BHK2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn3bQ8BHK2 Gm7332-201ENSMUST00000118351 454 ntBASIC18.28■□□□□ 0.52
Scn3bQ8BHK2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn3bQ8BHK2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn3bQ8BHK2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn3bQ8BHK2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn3bQ8BHK2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn3bQ8BHK2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn3bQ8BHK2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Scn3bQ8BHK2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn3bQ8BHK2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Scn3bQ8BHK2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn3bQ8BHK2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn3bQ8BHK2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Scn3bQ8BHK2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn3bQ8BHK2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Scn3bQ8BHK2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Scn3bQ8BHK2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Scn3bQ8BHK2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Scn3bQ8BHK2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Scn3bQ8BHK2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Scn3bQ8BHK2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scn3bQ8BHK2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scn3bQ8BHK2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn3bQ8BHK2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Scn3bQ8BHK2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scn3bQ8BHK2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn3bQ8BHK2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn3bQ8BHK2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn3bQ8BHK2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scn3bQ8BHK2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn3bQ8BHK2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.26■□□□□ 0.51
Scn3bQ8BHK2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn3bQ8BHK2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn3bQ8BHK2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn3bQ8BHK2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Scn3bQ8BHK2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn3bQ8BHK2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.25■□□□□ 0.51
Scn3bQ8BHK2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn3bQ8BHK2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn3bQ8BHK2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms