Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.26■□□□□ 0.35
Slc5a7Q8BGY9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc5a7Q8BGY9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc5a7Q8BGY9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc5a7Q8BGY9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc5a7Q8BGY9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc5a7Q8BGY9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc5a7Q8BGY9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc5a7Q8BGY9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc5a7Q8BGY9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc5a7Q8BGY9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc5a7Q8BGY9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Slc5a7Q8BGY9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc5a7Q8BGY9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc5a7Q8BGY9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc5a7Q8BGY9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc5a7Q8BGY9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc5a7Q8BGY9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.25■□□□□ 0.35
Slc5a7Q8BGY9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Slc5a7Q8BGY9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc5a7Q8BGY9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc5a7Q8BGY9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc5a7Q8BGY9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc5a7Q8BGY9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc5a7Q8BGY9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Slc5a7Q8BGY9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Slc5a7Q8BGY9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc5a7Q8BGY9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.24■□□□□ 0.35
Slc5a7Q8BGY9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc5a7Q8BGY9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc5a7Q8BGY9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc5a7Q8BGY9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc5a7Q8BGY9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc5a7Q8BGY9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc5a7Q8BGY9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc5a7Q8BGY9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc5a7Q8BGY9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Slc5a7Q8BGY9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.24■□□□□ 0.35
Slc5a7Q8BGY9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Slc5a7Q8BGY9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Slc5a7Q8BGY9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc5a7Q8BGY9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc5a7Q8BGY9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc5a7Q8BGY9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc5a7Q8BGY9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc5a7Q8BGY9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc5a7Q8BGY9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc5a7Q8BGY9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc5a7Q8BGY9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Slc5a7Q8BGY9 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.23■□□□□ 0.35
Slc5a7Q8BGY9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc5a7Q8BGY9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc5a7Q8BGY9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc5a7Q8BGY9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc5a7Q8BGY9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.22■□□□□ 0.35
Slc5a7Q8BGY9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.22■□□□□ 0.35
Slc5a7Q8BGY9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Slc5a7Q8BGY9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc5a7Q8BGY9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc5a7Q8BGY9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc5a7Q8BGY9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.22■□□□□ 0.35
Slc5a7Q8BGY9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc5a7Q8BGY9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc5a7Q8BGY9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc5a7Q8BGY9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc5a7Q8BGY9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Slc5a7Q8BGY9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc5a7Q8BGY9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.21■□□□□ 0.35
Slc5a7Q8BGY9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slc5a7Q8BGY9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc5a7Q8BGY9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc5a7Q8BGY9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Slc5a7Q8BGY9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc5a7Q8BGY9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Slc5a7Q8BGY9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc5a7Q8BGY9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc5a7Q8BGY9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc5a7Q8BGY9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slc5a7Q8BGY9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc5a7Q8BGY9 Gm27502-201ENSMUST00000183495 199 ntBASIC17.21■□□□□ 0.35
Slc5a7Q8BGY9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Slc5a7Q8BGY9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc5a7Q8BGY9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Slc5a7Q8BGY9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Slc5a7Q8BGY9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc5a7Q8BGY9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Slc5a7Q8BGY9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc5a7Q8BGY9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc5a7Q8BGY9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc5a7Q8BGY9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc5a7Q8BGY9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc5a7Q8BGY9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc5a7Q8BGY9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc5a7Q8BGY9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc5a7Q8BGY9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc5a7Q8BGY9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc5a7Q8BGY9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc5a7Q8BGY9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc5a7Q8BGY9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc5a7Q8BGY9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms