Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim50Q810I2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.21■□□□□ 0.67
Trim50Q810I2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.21■□□□□ 0.67
Trim50Q810I2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim50Q810I2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim50Q810I2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim50Q810I2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim50Q810I2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim50Q810I2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim50Q810I2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim50Q810I2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim50Q810I2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim50Q810I2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Trim50Q810I2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trim50Q810I2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
Trim50Q810I2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.2■□□□□ 0.66
Trim50Q810I2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Trim50Q810I2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
Trim50Q810I2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim50Q810I2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.2■□□□□ 0.66
Trim50Q810I2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Trim50Q810I2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim50Q810I2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim50Q810I2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Trim50Q810I2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim50Q810I2 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.19■□□□□ 0.66
Trim50Q810I2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim50Q810I2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim50Q810I2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim50Q810I2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim50Q810I2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim50Q810I2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trim50Q810I2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim50Q810I2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trim50Q810I2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim50Q810I2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim50Q810I2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim50Q810I2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim50Q810I2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim50Q810I2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.18■□□□□ 0.66
Trim50Q810I2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim50Q810I2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim50Q810I2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim50Q810I2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.18■□□□□ 0.66
Trim50Q810I2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.18■□□□□ 0.66
Trim50Q810I2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim50Q810I2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim50Q810I2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim50Q810I2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim50Q810I2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim50Q810I2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim50Q810I2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim50Q810I2 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.17■□□□□ 0.66
Trim50Q810I2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim50Q810I2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trim50Q810I2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim50Q810I2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim50Q810I2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trim50Q810I2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
Trim50Q810I2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim50Q810I2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Trim50Q810I2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trim50Q810I2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim50Q810I2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim50Q810I2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim50Q810I2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim50Q810I2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim50Q810I2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Trim50Q810I2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.15■□□□□ 0.66
Trim50Q810I2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.15■□□□□ 0.66
Trim50Q810I2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim50Q810I2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim50Q810I2 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.15■□□□□ 0.66
Trim50Q810I2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim50Q810I2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Trim50Q810I2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim50Q810I2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Trim50Q810I2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim50Q810I2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Trim50Q810I2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim50Q810I2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim50Q810I2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Trim50Q810I2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim50Q810I2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim50Q810I2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Trim50Q810I2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim50Q810I2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trim50Q810I2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim50Q810I2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Trim50Q810I2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim50Q810I2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trim50Q810I2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim50Q810I2 Gm43137-201ENSMUST00000198052 594 ntBASIC19.13■□□□□ 0.65
Trim50Q810I2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.13■□□□□ 0.65
Trim50Q810I2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim50Q810I2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim50Q810I2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
Trim50Q810I2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim50Q810I2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Trim50Q810I2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 176.5 ms