Protein–RNA interactions for Protein: Q80ZA4

Pkhd1l1, Fibrocystin-L, mousemouse

Predictions only

Length 4,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkhd1l1Q80ZA4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pkhd1l1Q80ZA4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pkhd1l1Q80ZA4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pkhd1l1Q80ZA4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pkhd1l1Q80ZA4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pkhd1l1Q80ZA4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pkhd1l1Q80ZA4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC11.92□□□□□ -0.5
Pkhd1l1Q80ZA4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pkhd1l1Q80ZA4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pkhd1l1Q80ZA4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pkhd1l1Q80ZA4 Gm27275-201ENSMUST00000184318 272 ntBASIC11.92□□□□□ -0.5
Pkhd1l1Q80ZA4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pkhd1l1Q80ZA4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC11.92□□□□□ -0.5
Pkhd1l1Q80ZA4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.91□□□□□ -0.5
Pkhd1l1Q80ZA4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pkhd1l1Q80ZA4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.91□□□□□ -0.5
Pkhd1l1Q80ZA4 Gm29241-201ENSMUST00000189260 1096 ntBASIC11.91□□□□□ -0.5
Pkhd1l1Q80ZA4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pkhd1l1Q80ZA4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pkhd1l1Q80ZA4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pkhd1l1Q80ZA4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC11.91□□□□□ -0.5
Pkhd1l1Q80ZA4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pkhd1l1Q80ZA4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pkhd1l1Q80ZA4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pkhd1l1Q80ZA4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pkhd1l1Q80ZA4 Gm3807-201ENSMUST00000193520 1168 ntBASIC11.91□□□□□ -0.5
Pkhd1l1Q80ZA4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pkhd1l1Q80ZA4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pkhd1l1Q80ZA4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pkhd1l1Q80ZA4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pkhd1l1Q80ZA4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pkhd1l1Q80ZA4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pkhd1l1Q80ZA4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC11.9□□□□□ -0.5
Pkhd1l1Q80ZA4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pkhd1l1Q80ZA4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Pkhd1l1Q80ZA4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pkhd1l1Q80ZA4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC11.89□□□□□ -0.51
Pkhd1l1Q80ZA4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pkhd1l1Q80ZA4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC11.89□□□□□ -0.51
Pkhd1l1Q80ZA4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pkhd1l1Q80ZA4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pkhd1l1Q80ZA4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pkhd1l1Q80ZA4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pkhd1l1Q80ZA4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC11.89□□□□□ -0.51
Pkhd1l1Q80ZA4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pkhd1l1Q80ZA4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pkhd1l1Q80ZA4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pkhd1l1Q80ZA4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pkhd1l1Q80ZA4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pkhd1l1Q80ZA4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pkhd1l1Q80ZA4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pkhd1l1Q80ZA4 Gm6365-201ENSMUST00000054711 744 ntBASIC11.89□□□□□ -0.51
Pkhd1l1Q80ZA4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pkhd1l1Q80ZA4 Mir6236-201ENSMUST00000184437 123 ntBASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pkhd1l1Q80ZA4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC11.87□□□□□ -0.51
Pkhd1l1Q80ZA4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pkhd1l1Q80ZA4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pkhd1l1Q80ZA4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pkhd1l1Q80ZA4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.87□□□□□ -0.51
Pkhd1l1Q80ZA4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC11.87□□□□□ -0.51
Pkhd1l1Q80ZA4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pkhd1l1Q80ZA4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pkhd1l1Q80ZA4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pkhd1l1Q80ZA4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pkhd1l1Q80ZA4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pkhd1l1Q80ZA4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pkhd1l1Q80ZA4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC11.87□□□□□ -0.51
Pkhd1l1Q80ZA4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pkhd1l1Q80ZA4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pkhd1l1Q80ZA4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pkhd1l1Q80ZA4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pkhd1l1Q80ZA4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pkhd1l1Q80ZA4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pkhd1l1Q80ZA4 Gm7290-201ENSMUST00000104990 617 ntBASIC11.86□□□□□ -0.51
Pkhd1l1Q80ZA4 Gm12918-201ENSMUST00000120234 636 ntBASIC11.86□□□□□ -0.51
Pkhd1l1Q80ZA4 Gm15710-201ENSMUST00000121821 636 ntBASIC11.86□□□□□ -0.51
Pkhd1l1Q80ZA4 Gm5075-201ENSMUST00000196916 622 ntBASIC11.86□□□□□ -0.51
Pkhd1l1Q80ZA4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC11.86□□□□□ -0.51
Pkhd1l1Q80ZA4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms