Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpp38Q80UU2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rpp38Q80UU2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpp38Q80UU2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Rpp38Q80UU2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.78■□□□□ 0.76
Rpp38Q80UU2 AA386476-201ENSMUST00000098781 1665 ntBASIC19.78■□□□□ 0.76
Rpp38Q80UU2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Rpp38Q80UU2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpp38Q80UU2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpp38Q80UU2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rpp38Q80UU2 Gm12821-201ENSMUST00000120022 600 ntBASIC19.78■□□□□ 0.76
Rpp38Q80UU2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rpp38Q80UU2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpp38Q80UU2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpp38Q80UU2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rpp38Q80UU2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Rpp38Q80UU2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpp38Q80UU2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpp38Q80UU2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpp38Q80UU2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpp38Q80UU2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rpp38Q80UU2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rpp38Q80UU2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpp38Q80UU2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Rpp38Q80UU2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.76■□□□□ 0.75
Rpp38Q80UU2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.76■□□□□ 0.75
Rpp38Q80UU2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rpp38Q80UU2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp38Q80UU2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp38Q80UU2 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.76■□□□□ 0.75
Rpp38Q80UU2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp38Q80UU2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp38Q80UU2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp38Q80UU2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp38Q80UU2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp38Q80UU2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp38Q80UU2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp38Q80UU2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp38Q80UU2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpp38Q80UU2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpp38Q80UU2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Rpp38Q80UU2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpp38Q80UU2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpp38Q80UU2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.75■□□□□ 0.75
Rpp38Q80UU2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.75■□□□□ 0.75
Rpp38Q80UU2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpp38Q80UU2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rpp38Q80UU2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Rpp38Q80UU2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpp38Q80UU2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Rpp38Q80UU2 Notumos-201ENSMUST00000151998 2659 ntBASIC19.74■□□□□ 0.75
Rpp38Q80UU2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpp38Q80UU2 Gm12251-201ENSMUST00000117893 792 ntBASIC19.74■□□□□ 0.75
Rpp38Q80UU2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rpp38Q80UU2 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.74■□□□□ 0.75
Rpp38Q80UU2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rpp38Q80UU2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rpp38Q80UU2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
Rpp38Q80UU2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpp38Q80UU2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rpp38Q80UU2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpp38Q80UU2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Rpp38Q80UU2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpp38Q80UU2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpp38Q80UU2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Rpp38Q80UU2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.73■□□□□ 0.75
Rpp38Q80UU2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rpp38Q80UU2 Gm27454-201ENSMUST00000185090 204 ntBASIC19.72■□□□□ 0.75
Rpp38Q80UU2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpp38Q80UU2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpp38Q80UU2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpp38Q80UU2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpp38Q80UU2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rpp38Q80UU2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpp38Q80UU2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpp38Q80UU2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpp38Q80UU2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpp38Q80UU2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rpp38Q80UU2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rpp38Q80UU2 Mir7075-201ENSMUST00000184187 82 ntBASIC19.71■□□□□ 0.75
Rpp38Q80UU2 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.71■□□□□ 0.75
Rpp38Q80UU2 Serp2-204ENSMUST00000228055 705 ntBASIC19.71■□□□□ 0.75
Rpp38Q80UU2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpp38Q80UU2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rpp38Q80UU2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpp38Q80UU2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rpp38Q80UU2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Rpp38Q80UU2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpp38Q80UU2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpp38Q80UU2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rpp38Q80UU2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.7■□□□□ 0.74
Rpp38Q80UU2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpp38Q80UU2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.7■□□□□ 0.74
Rpp38Q80UU2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpp38Q80UU2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpp38Q80UU2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpp38Q80UU2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpp38Q80UU2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rpp38Q80UU2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpp38Q80UU2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms