Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.67■□□□□ 0.74
Usp8Q80U87 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Usp8Q80U87 Etf1-202ENSMUST00000180351 108 ntBASIC19.67■□□□□ 0.74
Usp8Q80U87 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp8Q80U87 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.67■□□□□ 0.74
Usp8Q80U87 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp8Q80U87 Gm9870-201ENSMUST00000063874 645 ntBASIC19.66■□□□□ 0.74
Usp8Q80U87 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp8Q80U87 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Usp8Q80U87 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp8Q80U87 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Usp8Q80U87 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp8Q80U87 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.65■□□□□ 0.74
Usp8Q80U87 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp8Q80U87 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Usp8Q80U87 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp8Q80U87 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp8Q80U87 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.64■□□□□ 0.74
Usp8Q80U87 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp8Q80U87 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.64■□□□□ 0.73
Usp8Q80U87 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp8Q80U87 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp8Q80U87 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Usp8Q80U87 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Usp8Q80U87 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp8Q80U87 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp8Q80U87 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Usp8Q80U87 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
Usp8Q80U87 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.63■□□□□ 0.73
Usp8Q80U87 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp8Q80U87 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Usp8Q80U87 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.63■□□□□ 0.73
Usp8Q80U87 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp8Q80U87 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp8Q80U87 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Usp8Q80U87 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp8Q80U87 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp8Q80U87 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.62■□□□□ 0.73
Usp8Q80U87 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp8Q80U87 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp8Q80U87 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
Usp8Q80U87 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.62■□□□□ 0.73
Usp8Q80U87 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.62■□□□□ 0.73
Usp8Q80U87 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp8Q80U87 Gm9959-201ENSMUST00000068277 390 ntBASIC19.62■□□□□ 0.73
Usp8Q80U87 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp8Q80U87 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp8Q80U87 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp8Q80U87 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp8Q80U87 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp8Q80U87 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp8Q80U87 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Usp8Q80U87 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.61■□□□□ 0.73
Usp8Q80U87 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp8Q80U87 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp8Q80U87 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp8Q80U87 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Usp8Q80U87 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp8Q80U87 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Usp8Q80U87 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Usp8Q80U87 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.6■□□□□ 0.73
Usp8Q80U87 Gm43530-201ENSMUST00000195920 274 ntBASIC19.6■□□□□ 0.73
Usp8Q80U87 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp8Q80U87 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp8Q80U87 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Usp8Q80U87 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.6■□□□□ 0.73
Usp8Q80U87 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp8Q80U87 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp8Q80U87 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp8Q80U87 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Usp8Q80U87 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Usp8Q80U87 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp8Q80U87 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp8Q80U87 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp8Q80U87 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.59■□□□□ 0.73
Usp8Q80U87 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Usp8Q80U87 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.59■□□□□ 0.73
Usp8Q80U87 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.59■□□□□ 0.73
Usp8Q80U87 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp8Q80U87 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp8Q80U87 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp8Q80U87 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
Usp8Q80U87 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.59■□□□□ 0.73
Usp8Q80U87 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp8Q80U87 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp8Q80U87 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp8Q80U87 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Usp8Q80U87 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.58■□□□□ 0.72
Usp8Q80U87 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Usp8Q80U87 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp8Q80U87 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp8Q80U87 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp8Q80U87 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Usp8Q80U87 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp8Q80U87 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp8Q80U87 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp8Q80U87 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Usp8Q80U87 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Usp8Q80U87 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp8Q80U87 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms