Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ush1gQ80T11 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ush1gQ80T11 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ush1gQ80T11 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ush1gQ80T11 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ush1gQ80T11 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ush1gQ80T11 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ush1gQ80T11 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ush1gQ80T11 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ush1gQ80T11 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ush1gQ80T11 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.62■■□□□ 1.05
Ush1gQ80T11 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ush1gQ80T11 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ush1gQ80T11 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Ush1gQ80T11 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ush1gQ80T11 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ush1gQ80T11 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ush1gQ80T11 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Ush1gQ80T11 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.61■■□□□ 1.05
Ush1gQ80T11 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.61■■□□□ 1.05
Ush1gQ80T11 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.61■■□□□ 1.05
Ush1gQ80T11 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Ush1gQ80T11 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ush1gQ80T11 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ush1gQ80T11 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Ush1gQ80T11 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.6■■□□□ 1.05
Ush1gQ80T11 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Ush1gQ80T11 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ush1gQ80T11 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ush1gQ80T11 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ush1gQ80T11 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ush1gQ80T11 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ush1gQ80T11 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ush1gQ80T11 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ush1gQ80T11 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.59■■□□□ 1.05
Ush1gQ80T11 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ush1gQ80T11 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ush1gQ80T11 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ush1gQ80T11 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ush1gQ80T11 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Ush1gQ80T11 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Ush1gQ80T11 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ush1gQ80T11 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ush1gQ80T11 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Ush1gQ80T11 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.58■■□□□ 1.05
Ush1gQ80T11 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ush1gQ80T11 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.58■■□□□ 1.05
Ush1gQ80T11 Mir6236-201ENSMUST00000184437 123 ntBASIC21.58■■□□□ 1.05
Ush1gQ80T11 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ush1gQ80T11 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.58■■□□□ 1.04
Ush1gQ80T11 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Ush1gQ80T11 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ush1gQ80T11 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Ush1gQ80T11 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Ush1gQ80T11 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ush1gQ80T11 Gm27011-201ENSMUST00000182352 972 ntBASIC21.57■■□□□ 1.04
Ush1gQ80T11 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ush1gQ80T11 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ush1gQ80T11 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ush1gQ80T11 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ush1gQ80T11 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ush1gQ80T11 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Ush1gQ80T11 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.56■■□□□ 1.04
Ush1gQ80T11 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ush1gQ80T11 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
Ush1gQ80T11 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ush1gQ80T11 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ush1gQ80T11 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.56■■□□□ 1.04
Ush1gQ80T11 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Ush1gQ80T11 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ush1gQ80T11 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ush1gQ80T11 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ush1gQ80T11 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ush1gQ80T11 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ush1gQ80T11 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.55■■□□□ 1.04
Ush1gQ80T11 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.55■■□□□ 1.04
Ush1gQ80T11 Gm10602-201ENSMUST00000098239 609 ntBASIC21.55■■□□□ 1.04
Ush1gQ80T11 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ush1gQ80T11 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ush1gQ80T11 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ush1gQ80T11 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ush1gQ80T11 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ush1gQ80T11 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ush1gQ80T11 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ush1gQ80T11 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.54■■□□□ 1.04
Ush1gQ80T11 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ush1gQ80T11 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ush1gQ80T11 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.54■■□□□ 1.04
Ush1gQ80T11 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ush1gQ80T11 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ush1gQ80T11 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ush1gQ80T11 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ush1gQ80T11 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ush1gQ80T11 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ush1gQ80T11 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Ush1gQ80T11 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ush1gQ80T11 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Ush1gQ80T11 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.53■■□□□ 1.04
Ush1gQ80T11 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.53■■□□□ 1.04
Ush1gQ80T11 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms