Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm10252-201ENSMUST00000209541 832 ntBASIC20.54■□□□□ 0.88
Prpf38bQ80SY5 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.54■□□□□ 0.88
Prpf38bQ80SY5 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.54■□□□□ 0.88
Prpf38bQ80SY5 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
Prpf38bQ80SY5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Prpf38bQ80SY5 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf38bQ80SY5 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf38bQ80SY5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf38bQ80SY5 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf38bQ80SY5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf38bQ80SY5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf38bQ80SY5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Prpf38bQ80SY5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Prpf38bQ80SY5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf38bQ80SY5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf38bQ80SY5 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Prpf38bQ80SY5 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Prpf38bQ80SY5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Prpf38bQ80SY5 Gm22240-201ENSMUST00000175225 82 ntBASIC20.51■□□□□ 0.87
Prpf38bQ80SY5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf38bQ80SY5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf38bQ80SY5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf38bQ80SY5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.51■□□□□ 0.87
Prpf38bQ80SY5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf38bQ80SY5 Gm12441-201ENSMUST00000121806 588 ntBASIC20.5■□□□□ 0.87
Prpf38bQ80SY5 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf38bQ80SY5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Prpf38bQ80SY5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf38bQ80SY5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf38bQ80SY5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Prpf38bQ80SY5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf38bQ80SY5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Prpf38bQ80SY5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf38bQ80SY5 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf38bQ80SY5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf38bQ80SY5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.49■□□□□ 0.87
Prpf38bQ80SY5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Prpf38bQ80SY5 Gm20760-201ENSMUST00000179197 648 ntBASIC20.49■□□□□ 0.87
Prpf38bQ80SY5 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.49■□□□□ 0.87
Prpf38bQ80SY5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
Prpf38bQ80SY5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf38bQ80SY5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf38bQ80SY5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf38bQ80SY5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf38bQ80SY5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf38bQ80SY5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf38bQ80SY5 Gm7977-201ENSMUST00000193787 748 ntBASIC20.48■□□□□ 0.87
Prpf38bQ80SY5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.48■□□□□ 0.87
Prpf38bQ80SY5 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf38bQ80SY5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf38bQ80SY5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf38bQ80SY5 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Prpf38bQ80SY5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf38bQ80SY5 Smad6-203ENSMUST00000179458 273 ntBASIC20.47■□□□□ 0.87
Prpf38bQ80SY5 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf38bQ80SY5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Prpf38bQ80SY5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf38bQ80SY5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Prpf38bQ80SY5 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.46■□□□□ 0.87
Prpf38bQ80SY5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf38bQ80SY5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf38bQ80SY5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf38bQ80SY5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf38bQ80SY5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.46■□□□□ 0.87
Prpf38bQ80SY5 Mir7071-201ENSMUST00000184847 69 ntBASIC20.46■□□□□ 0.87
Prpf38bQ80SY5 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.46■□□□□ 0.87
Prpf38bQ80SY5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf38bQ80SY5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Prpf38bQ80SY5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf38bQ80SY5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
Prpf38bQ80SY5 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf38bQ80SY5 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Prpf38bQ80SY5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Prpf38bQ80SY5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf38bQ80SY5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf38bQ80SY5 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf38bQ80SY5 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf38bQ80SY5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf38bQ80SY5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf38bQ80SY5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf38bQ80SY5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Prpf38bQ80SY5 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.45■□□□□ 0.86
Prpf38bQ80SY5 Gm7143-201ENSMUST00000222811 859 ntBASIC20.45■□□□□ 0.86
Prpf38bQ80SY5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Prpf38bQ80SY5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf38bQ80SY5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf38bQ80SY5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf38bQ80SY5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf38bQ80SY5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf38bQ80SY5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf38bQ80SY5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf38bQ80SY5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf38bQ80SY5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf38bQ80SY5 Gm10653-202ENSMUST00000139570 835 ntBASIC20.44■□□□□ 0.86
Prpf38bQ80SY5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.44■□□□□ 0.86
Prpf38bQ80SY5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Prpf38bQ80SY5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf38bQ80SY5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf38bQ80SY5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf38bQ80SY5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms