Protein–RNA interactions for Protein: Q6ZWS4

Cnih3, Protein cornichon homolog 3, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih3Q6ZWS4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cnih3Q6ZWS4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.11■□□□□ 0.49
Cnih3Q6ZWS4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cnih3Q6ZWS4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cnih3Q6ZWS4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cnih3Q6ZWS4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cnih3Q6ZWS4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cnih3Q6ZWS4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cnih3Q6ZWS4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cnih3Q6ZWS4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cnih3Q6ZWS4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnih3Q6ZWS4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cnih3Q6ZWS4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnih3Q6ZWS4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnih3Q6ZWS4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.1■□□□□ 0.49
Cnih3Q6ZWS4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnih3Q6ZWS4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnih3Q6ZWS4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnih3Q6ZWS4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Cnih3Q6ZWS4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnih3Q6ZWS4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnih3Q6ZWS4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cnih3Q6ZWS4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cnih3Q6ZWS4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.09■□□□□ 0.49
Cnih3Q6ZWS4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cnih3Q6ZWS4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cnih3Q6ZWS4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.09■□□□□ 0.49
Cnih3Q6ZWS4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.09■□□□□ 0.49
Cnih3Q6ZWS4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cnih3Q6ZWS4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cnih3Q6ZWS4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Cnih3Q6ZWS4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cnih3Q6ZWS4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cnih3Q6ZWS4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cnih3Q6ZWS4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Cnih3Q6ZWS4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cnih3Q6ZWS4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cnih3Q6ZWS4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Cnih3Q6ZWS4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
Cnih3Q6ZWS4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Cnih3Q6ZWS4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cnih3Q6ZWS4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Cnih3Q6ZWS4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cnih3Q6ZWS4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cnih3Q6ZWS4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cnih3Q6ZWS4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cnih3Q6ZWS4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.07■□□□□ 0.48
Cnih3Q6ZWS4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cnih3Q6ZWS4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Cnih3Q6ZWS4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cnih3Q6ZWS4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cnih3Q6ZWS4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cnih3Q6ZWS4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cnih3Q6ZWS4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cnih3Q6ZWS4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cnih3Q6ZWS4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cnih3Q6ZWS4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cnih3Q6ZWS4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cnih3Q6ZWS4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cnih3Q6ZWS4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cnih3Q6ZWS4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cnih3Q6ZWS4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cnih3Q6ZWS4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cnih3Q6ZWS4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Cnih3Q6ZWS4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cnih3Q6ZWS4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cnih3Q6ZWS4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Cnih3Q6ZWS4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cnih3Q6ZWS4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cnih3Q6ZWS4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cnih3Q6ZWS4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cnih3Q6ZWS4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cnih3Q6ZWS4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cnih3Q6ZWS4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Cnih3Q6ZWS4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.05■□□□□ 0.48
Cnih3Q6ZWS4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cnih3Q6ZWS4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cnih3Q6ZWS4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cnih3Q6ZWS4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cnih3Q6ZWS4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.04■□□□□ 0.48
Cnih3Q6ZWS4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cnih3Q6ZWS4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cnih3Q6ZWS4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cnih3Q6ZWS4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cnih3Q6ZWS4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cnih3Q6ZWS4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cnih3Q6ZWS4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cnih3Q6ZWS4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cnih3Q6ZWS4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cnih3Q6ZWS4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Cnih3Q6ZWS4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cnih3Q6ZWS4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.04■□□□□ 0.48
Cnih3Q6ZWS4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cnih3Q6ZWS4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cnih3Q6ZWS4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cnih3Q6ZWS4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cnih3Q6ZWS4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cnih3Q6ZWS4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cnih3Q6ZWS4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cnih3Q6ZWS4 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms