Protein–RNA interactions for Protein: Q6PE13

Prrt3, Proline-rich transmembrane protein 3, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt3Q6PE13 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Prrt3Q6PE13 Gm10033-202ENSMUST00000211874 928 ntBASIC20.77■□□□□ 0.92
Prrt3Q6PE13 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.77■□□□□ 0.91
Prrt3Q6PE13 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.76■□□□□ 0.91
Prrt3Q6PE13 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prrt3Q6PE13 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Prrt3Q6PE13 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prrt3Q6PE13 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prrt3Q6PE13 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Prrt3Q6PE13 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prrt3Q6PE13 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prrt3Q6PE13 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prrt3Q6PE13 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prrt3Q6PE13 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Prrt3Q6PE13 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Prrt3Q6PE13 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.75■□□□□ 0.91
Prrt3Q6PE13 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.75■□□□□ 0.91
Prrt3Q6PE13 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Prrt3Q6PE13 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prrt3Q6PE13 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Prrt3Q6PE13 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Prrt3Q6PE13 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prrt3Q6PE13 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prrt3Q6PE13 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Prrt3Q6PE13 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prrt3Q6PE13 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prrt3Q6PE13 Gm42790-201ENSMUST00000201268 969 ntBASIC20.74■□□□□ 0.91
Prrt3Q6PE13 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Prrt3Q6PE13 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.74■□□□□ 0.91
Prrt3Q6PE13 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prrt3Q6PE13 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Prrt3Q6PE13 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Prrt3Q6PE13 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.74■□□□□ 0.91
Prrt3Q6PE13 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Prrt3Q6PE13 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Prrt3Q6PE13 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prrt3Q6PE13 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prrt3Q6PE13 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prrt3Q6PE13 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prrt3Q6PE13 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Prrt3Q6PE13 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prrt3Q6PE13 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prrt3Q6PE13 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.72■□□□□ 0.91
Prrt3Q6PE13 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.72■□□□□ 0.91
Prrt3Q6PE13 Gm18671-201ENSMUST00000214826 683 ntBASIC20.72■□□□□ 0.91
Prrt3Q6PE13 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.72■□□□□ 0.91
Prrt3Q6PE13 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.72■□□□□ 0.91
Prrt3Q6PE13 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prrt3Q6PE13 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prrt3Q6PE13 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prrt3Q6PE13 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prrt3Q6PE13 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prrt3Q6PE13 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prrt3Q6PE13 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Prrt3Q6PE13 Gm37179-201ENSMUST00000194862 823 ntBASIC20.71■□□□□ 0.91
Prrt3Q6PE13 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.71■□□□□ 0.91
Prrt3Q6PE13 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Prrt3Q6PE13 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prrt3Q6PE13 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prrt3Q6PE13 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Prrt3Q6PE13 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prrt3Q6PE13 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prrt3Q6PE13 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prrt3Q6PE13 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Prrt3Q6PE13 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prrt3Q6PE13 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prrt3Q6PE13 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Prrt3Q6PE13 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.7■□□□□ 0.9
Prrt3Q6PE13 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.7■□□□□ 0.9
Prrt3Q6PE13 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Prrt3Q6PE13 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prrt3Q6PE13 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prrt3Q6PE13 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prrt3Q6PE13 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Prrt3Q6PE13 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Prrt3Q6PE13 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prrt3Q6PE13 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Prrt3Q6PE13 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prrt3Q6PE13 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.69■□□□□ 0.9
Prrt3Q6PE13 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Prrt3Q6PE13 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.69■□□□□ 0.9
Prrt3Q6PE13 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.69■□□□□ 0.9
Prrt3Q6PE13 AV356131-201ENSMUST00000206201 750 ntBASIC20.69■□□□□ 0.9
Prrt3Q6PE13 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
Prrt3Q6PE13 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prrt3Q6PE13 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prrt3Q6PE13 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prrt3Q6PE13 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
Prrt3Q6PE13 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Prrt3Q6PE13 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prrt3Q6PE13 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prrt3Q6PE13 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prrt3Q6PE13 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prrt3Q6PE13 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Prrt3Q6PE13 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prrt3Q6PE13 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Prrt3Q6PE13 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prrt3Q6PE13 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.67■□□□□ 0.9
Prrt3Q6PE13 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.67■□□□□ 0.9
Prrt3Q6PE13 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms