Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Snrnp40Q6PE01 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Snrnp40Q6PE01 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.46■□□□□ 0.39
Snrnp40Q6PE01 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.45■□□□□ 0.38
Snrnp40Q6PE01 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Snrnp40Q6PE01 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.45■□□□□ 0.38
Snrnp40Q6PE01 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.45■□□□□ 0.38
Snrnp40Q6PE01 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.45■□□□□ 0.38
Snrnp40Q6PE01 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Snrnp40Q6PE01 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Snrnp40Q6PE01 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Snrnp40Q6PE01 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Snrnp40Q6PE01 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Snrnp40Q6PE01 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Snrnp40Q6PE01 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Snrnp40Q6PE01 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Snrnp40Q6PE01 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Snrnp40Q6PE01 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Snrnp40Q6PE01 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.44■□□□□ 0.38
Snrnp40Q6PE01 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Snrnp40Q6PE01 Gm12527-201ENSMUST00000117967 564 ntBASIC17.44■□□□□ 0.38
Snrnp40Q6PE01 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.44■□□□□ 0.38
Snrnp40Q6PE01 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.44■□□□□ 0.38
Snrnp40Q6PE01 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Snrnp40Q6PE01 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Snrnp40Q6PE01 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Snrnp40Q6PE01 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Snrnp40Q6PE01 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Snrnp40Q6PE01 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Snrnp40Q6PE01 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Snrnp40Q6PE01 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.43■□□□□ 0.38
Snrnp40Q6PE01 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.43■□□□□ 0.38
Snrnp40Q6PE01 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Snrnp40Q6PE01 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Snrnp40Q6PE01 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Snrnp40Q6PE01 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Snrnp40Q6PE01 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Snrnp40Q6PE01 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.42■□□□□ 0.38
Snrnp40Q6PE01 Gm8520-201ENSMUST00000186517 868 ntBASIC17.42■□□□□ 0.38
Snrnp40Q6PE01 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Snrnp40Q6PE01 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Snrnp40Q6PE01 Gm6365-201ENSMUST00000054711 744 ntBASIC17.42■□□□□ 0.38
Snrnp40Q6PE01 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Snrnp40Q6PE01 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Snrnp40Q6PE01 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
Snrnp40Q6PE01 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Snrnp40Q6PE01 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Snrnp40Q6PE01 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Snrnp40Q6PE01 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snrnp40Q6PE01 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snrnp40Q6PE01 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snrnp40Q6PE01 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snrnp40Q6PE01 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snrnp40Q6PE01 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snrnp40Q6PE01 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snrnp40Q6PE01 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snrnp40Q6PE01 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Snrnp40Q6PE01 Gm13146-201ENSMUST00000118508 780 ntBASIC17.41■□□□□ 0.38
Snrnp40Q6PE01 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Snrnp40Q6PE01 Gm5408-201ENSMUST00000197998 747 ntBASIC17.41■□□□□ 0.38
Snrnp40Q6PE01 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.41■□□□□ 0.38
Snrnp40Q6PE01 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snrnp40Q6PE01 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snrnp40Q6PE01 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Snrnp40Q6PE01 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.41■□□□□ 0.38
Snrnp40Q6PE01 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snrnp40Q6PE01 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Snrnp40Q6PE01 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Snrnp40Q6PE01 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snrnp40Q6PE01 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snrnp40Q6PE01 Gm7290-201ENSMUST00000104990 617 ntBASIC17.4■□□□□ 0.38
Snrnp40Q6PE01 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.4■□□□□ 0.38
Snrnp40Q6PE01 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Snrnp40Q6PE01 Gm13148-201ENSMUST00000118892 745 ntBASIC17.4■□□□□ 0.38
Snrnp40Q6PE01 Gm12918-201ENSMUST00000120234 636 ntBASIC17.4■□□□□ 0.38
Snrnp40Q6PE01 Gm15710-201ENSMUST00000121821 636 ntBASIC17.4■□□□□ 0.38
Snrnp40Q6PE01 Gm5075-201ENSMUST00000196916 622 ntBASIC17.4■□□□□ 0.38
Snrnp40Q6PE01 Gm10252-201ENSMUST00000209541 832 ntBASIC17.4■□□□□ 0.38
Snrnp40Q6PE01 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snrnp40Q6PE01 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.4■□□□□ 0.38
Snrnp40Q6PE01 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.4■□□□□ 0.38
Snrnp40Q6PE01 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snrnp40Q6PE01 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snrnp40Q6PE01 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snrnp40Q6PE01 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snrnp40Q6PE01 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Snrnp40Q6PE01 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Snrnp40Q6PE01 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Snrnp40Q6PE01 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Snrnp40Q6PE01 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Snrnp40Q6PE01 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Snrnp40Q6PE01 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Snrnp40Q6PE01 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.39■□□□□ 0.37
Snrnp40Q6PE01 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snrnp40Q6PE01 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Snrnp40Q6PE01 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snrnp40Q6PE01 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snrnp40Q6PE01 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snrnp40Q6PE01 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snrnp40Q6PE01 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms