Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf220Q6PDX6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf220Q6PDX6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf220Q6PDX6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.61■□□□□ 0.57
Rnf220Q6PDX6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf220Q6PDX6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf220Q6PDX6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf220Q6PDX6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf220Q6PDX6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf220Q6PDX6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf220Q6PDX6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf220Q6PDX6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf220Q6PDX6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Rnf220Q6PDX6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rnf220Q6PDX6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf220Q6PDX6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf220Q6PDX6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rnf220Q6PDX6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.6■□□□□ 0.57
Rnf220Q6PDX6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rnf220Q6PDX6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf220Q6PDX6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf220Q6PDX6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf220Q6PDX6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf220Q6PDX6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf220Q6PDX6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf220Q6PDX6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rnf220Q6PDX6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf220Q6PDX6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf220Q6PDX6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.6■□□□□ 0.57
Rnf220Q6PDX6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf220Q6PDX6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf220Q6PDX6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf220Q6PDX6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Rnf220Q6PDX6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf220Q6PDX6 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf220Q6PDX6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf220Q6PDX6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rnf220Q6PDX6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf220Q6PDX6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf220Q6PDX6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf220Q6PDX6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rnf220Q6PDX6 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.59■□□□□ 0.57
Rnf220Q6PDX6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf220Q6PDX6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf220Q6PDX6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rnf220Q6PDX6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf220Q6PDX6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf220Q6PDX6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf220Q6PDX6 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.58■□□□□ 0.56
Rnf220Q6PDX6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf220Q6PDX6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
Rnf220Q6PDX6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Rnf220Q6PDX6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf220Q6PDX6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf220Q6PDX6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf220Q6PDX6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.57■□□□□ 0.56
Rnf220Q6PDX6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf220Q6PDX6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf220Q6PDX6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf220Q6PDX6 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.57■□□□□ 0.56
Rnf220Q6PDX6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rnf220Q6PDX6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf220Q6PDX6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf220Q6PDX6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf220Q6PDX6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf220Q6PDX6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf220Q6PDX6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf220Q6PDX6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rnf220Q6PDX6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf220Q6PDX6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf220Q6PDX6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Rnf220Q6PDX6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf220Q6PDX6 Mir6538-201ENSMUST00000183713 110 ntBASIC18.56■□□□□ 0.56
Rnf220Q6PDX6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.56■□□□□ 0.56
Rnf220Q6PDX6 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.56■□□□□ 0.56
Rnf220Q6PDX6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf220Q6PDX6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf220Q6PDX6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf220Q6PDX6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf220Q6PDX6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rnf220Q6PDX6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf220Q6PDX6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf220Q6PDX6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.55■□□□□ 0.56
Rnf220Q6PDX6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf220Q6PDX6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf220Q6PDX6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf220Q6PDX6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf220Q6PDX6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf220Q6PDX6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rnf220Q6PDX6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf220Q6PDX6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf220Q6PDX6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.54■□□□□ 0.56
Rnf220Q6PDX6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.54■□□□□ 0.56
Rnf220Q6PDX6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf220Q6PDX6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.54■□□□□ 0.56
Rnf220Q6PDX6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Rnf220Q6PDX6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.54■□□□□ 0.56
Rnf220Q6PDX6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf220Q6PDX6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf220Q6PDX6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms