Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.06■□□□□ 0.8
Sp140Q6NSQ5 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sp140Q6NSQ5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sp140Q6NSQ5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sp140Q6NSQ5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sp140Q6NSQ5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.05■□□□□ 0.8
Sp140Q6NSQ5 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sp140Q6NSQ5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sp140Q6NSQ5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sp140Q6NSQ5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sp140Q6NSQ5 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.05■□□□□ 0.8
Sp140Q6NSQ5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sp140Q6NSQ5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Sp140Q6NSQ5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sp140Q6NSQ5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sp140Q6NSQ5 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sp140Q6NSQ5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Sp140Q6NSQ5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sp140Q6NSQ5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Sp140Q6NSQ5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sp140Q6NSQ5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sp140Q6NSQ5 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.03■□□□□ 0.8
Sp140Q6NSQ5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.03■□□□□ 0.8
Sp140Q6NSQ5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sp140Q6NSQ5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Sp140Q6NSQ5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Sp140Q6NSQ5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.02■□□□□ 0.8
Sp140Q6NSQ5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sp140Q6NSQ5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sp140Q6NSQ5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sp140Q6NSQ5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.02■□□□□ 0.8
Sp140Q6NSQ5 Golgb1-201ENSMUST00000023534 498 ntBASIC20.02■□□□□ 0.8
Sp140Q6NSQ5 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sp140Q6NSQ5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sp140Q6NSQ5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.02■□□□□ 0.8
Sp140Q6NSQ5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sp140Q6NSQ5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Sp140Q6NSQ5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Sp140Q6NSQ5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Sp140Q6NSQ5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sp140Q6NSQ5 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.02■□□□□ 0.79
Sp140Q6NSQ5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sp140Q6NSQ5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
Sp140Q6NSQ5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sp140Q6NSQ5 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20■□□□□ 0.79
Sp140Q6NSQ5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Sp140Q6NSQ5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sp140Q6NSQ5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sp140Q6NSQ5 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sp140Q6NSQ5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Sp140Q6NSQ5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20■□□□□ 0.79
Sp140Q6NSQ5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Sp140Q6NSQ5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sp140Q6NSQ5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sp140Q6NSQ5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sp140Q6NSQ5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sp140Q6NSQ5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sp140Q6NSQ5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sp140Q6NSQ5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sp140Q6NSQ5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sp140Q6NSQ5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Sp140Q6NSQ5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Sp140Q6NSQ5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Sp140Q6NSQ5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.98■□□□□ 0.79
Sp140Q6NSQ5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Sp140Q6NSQ5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.98■□□□□ 0.79
Sp140Q6NSQ5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.98■□□□□ 0.79
Sp140Q6NSQ5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sp140Q6NSQ5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sp140Q6NSQ5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sp140Q6NSQ5 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sp140Q6NSQ5 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.98■□□□□ 0.79
Sp140Q6NSQ5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Sp140Q6NSQ5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sp140Q6NSQ5 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.97■□□□□ 0.79
Sp140Q6NSQ5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.97■□□□□ 0.79
Sp140Q6NSQ5 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sp140Q6NSQ5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.97■□□□□ 0.79
Sp140Q6NSQ5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sp140Q6NSQ5 Gm12922-201ENSMUST00000120626 809 ntBASIC19.96■□□□□ 0.79
Sp140Q6NSQ5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.96■□□□□ 0.79
Sp140Q6NSQ5 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sp140Q6NSQ5 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sp140Q6NSQ5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sp140Q6NSQ5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sp140Q6NSQ5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sp140Q6NSQ5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sp140Q6NSQ5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sp140Q6NSQ5 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sp140Q6NSQ5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.95■□□□□ 0.78
Sp140Q6NSQ5 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.95■□□□□ 0.78
Sp140Q6NSQ5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sp140Q6NSQ5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sp140Q6NSQ5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Sp140Q6NSQ5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sp140Q6NSQ5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sp140Q6NSQ5 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Sp140Q6NSQ5 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.94■□□□□ 0.78
Sp140Q6NSQ5 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.94■□□□□ 0.78
Sp140Q6NSQ5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms