Protein–RNA interactions for Protein: Q68FH0

Pkp4, Plakophilin-4, mousemouse

Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4Q68FH0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pkp4Q68FH0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pkp4Q68FH0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pkp4Q68FH0 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.85■□□□□ 0.61
Pkp4Q68FH0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Pkp4Q68FH0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pkp4Q68FH0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pkp4Q68FH0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pkp4Q68FH0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pkp4Q68FH0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pkp4Q68FH0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pkp4Q68FH0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pkp4Q68FH0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.84■□□□□ 0.61
Pkp4Q68FH0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pkp4Q68FH0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pkp4Q68FH0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pkp4Q68FH0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pkp4Q68FH0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pkp4Q68FH0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Pkp4Q68FH0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pkp4Q68FH0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pkp4Q68FH0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pkp4Q68FH0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.83■□□□□ 0.6
Pkp4Q68FH0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Pkp4Q68FH0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Pkp4Q68FH0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Pkp4Q68FH0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.83■□□□□ 0.6
Pkp4Q68FH0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pkp4Q68FH0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.82■□□□□ 0.6
Pkp4Q68FH0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp4Q68FH0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Pkp4Q68FH0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp4Q68FH0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp4Q68FH0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp4Q68FH0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp4Q68FH0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
Pkp4Q68FH0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.82■□□□□ 0.6
Pkp4Q68FH0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp4Q68FH0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp4Q68FH0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp4Q68FH0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp4Q68FH0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp4Q68FH0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pkp4Q68FH0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pkp4Q68FH0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pkp4Q68FH0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pkp4Q68FH0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.81■□□□□ 0.6
Pkp4Q68FH0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.81■□□□□ 0.6
Pkp4Q68FH0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pkp4Q68FH0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pkp4Q68FH0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pkp4Q68FH0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pkp4Q68FH0 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.81■□□□□ 0.6
Pkp4Q68FH0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp4Q68FH0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp4Q68FH0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp4Q68FH0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pkp4Q68FH0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Pkp4Q68FH0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp4Q68FH0 Golph3-202ENSMUST00000226517 2359 ntBASIC18.8■□□□□ 0.6
Pkp4Q68FH0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.8■□□□□ 0.6
Pkp4Q68FH0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp4Q68FH0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp4Q68FH0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp4Q68FH0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Pkp4Q68FH0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp4Q68FH0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp4Q68FH0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp4Q68FH0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pkp4Q68FH0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp4Q68FH0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp4Q68FH0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.79■□□□□ 0.6
Pkp4Q68FH0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.79■□□□□ 0.6
Pkp4Q68FH0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
Pkp4Q68FH0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.79■□□□□ 0.6
Pkp4Q68FH0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp4Q68FH0 Gm12922-201ENSMUST00000120626 809 ntBASIC18.79■□□□□ 0.6
Pkp4Q68FH0 Golgb1-201ENSMUST00000023534 498 ntBASIC18.79■□□□□ 0.6
Pkp4Q68FH0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp4Q68FH0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp4Q68FH0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp4Q68FH0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp4Q68FH0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp4Q68FH0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp4Q68FH0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp4Q68FH0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp4Q68FH0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp4Q68FH0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pkp4Q68FH0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pkp4Q68FH0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pkp4Q68FH0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pkp4Q68FH0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pkp4Q68FH0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pkp4Q68FH0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.78■□□□□ 0.6
Pkp4Q68FH0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pkp4Q68FH0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.78■□□□□ 0.6
Pkp4Q68FH0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pkp4Q68FH0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pkp4Q68FH0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pkp4Q68FH0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms