Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VclQ64727 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VclQ64727 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
VclQ64727 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VclQ64727 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VclQ64727 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
VclQ64727 Gm43017-201ENSMUST00000198296 752 ntBASIC19.36■□□□□ 0.69
VclQ64727 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.36■□□□□ 0.69
VclQ64727 Serp2-204ENSMUST00000228055 705 ntBASIC19.36■□□□□ 0.69
VclQ64727 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VclQ64727 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VclQ64727 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VclQ64727 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VclQ64727 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.35■□□□□ 0.69
VclQ64727 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VclQ64727 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.35■□□□□ 0.69
VclQ64727 Gm43173-201ENSMUST00000202246 593 ntBASIC19.35■□□□□ 0.69
VclQ64727 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VclQ64727 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VclQ64727 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VclQ64727 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VclQ64727 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VclQ64727 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VclQ64727 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VclQ64727 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.34■□□□□ 0.69
VclQ64727 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.34■□□□□ 0.69
VclQ64727 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
VclQ64727 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VclQ64727 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VclQ64727 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.34■□□□□ 0.69
VclQ64727 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
VclQ64727 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
VclQ64727 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.33■□□□□ 0.68
VclQ64727 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VclQ64727 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VclQ64727 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VclQ64727 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
VclQ64727 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
VclQ64727 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VclQ64727 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.33■□□□□ 0.68
VclQ64727 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VclQ64727 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
VclQ64727 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VclQ64727 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VclQ64727 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
VclQ64727 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VclQ64727 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VclQ64727 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VclQ64727 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
VclQ64727 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
VclQ64727 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VclQ64727 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
VclQ64727 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
VclQ64727 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VclQ64727 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.31■□□□□ 0.68
VclQ64727 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
VclQ64727 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VclQ64727 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.31■□□□□ 0.68
VclQ64727 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.31■□□□□ 0.68
VclQ64727 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
VclQ64727 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VclQ64727 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
VclQ64727 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VclQ64727 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VclQ64727 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
VclQ64727 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
VclQ64727 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
VclQ64727 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VclQ64727 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
VclQ64727 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VclQ64727 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
VclQ64727 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
VclQ64727 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.3■□□□□ 0.68
VclQ64727 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VclQ64727 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VclQ64727 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VclQ64727 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VclQ64727 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
VclQ64727 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VclQ64727 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
VclQ64727 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
VclQ64727 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VclQ64727 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VclQ64727 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
VclQ64727 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VclQ64727 Gm26833-201ENSMUST00000180899 440 ntBASIC19.29■□□□□ 0.68
VclQ64727 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.29■□□□□ 0.68
VclQ64727 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VclQ64727 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VclQ64727 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.29■□□□□ 0.68
VclQ64727 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
VclQ64727 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VclQ64727 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VclQ64727 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
VclQ64727 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VclQ64727 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VclQ64727 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VclQ64727 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VclQ64727 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VclQ64727 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms