Protein–RNA interactions for Protein: Q61660

Foxj1, Forkhead box protein J1, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxj1Q61660 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Foxj1Q61660 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Foxj1Q61660 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Foxj1Q61660 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Foxj1Q61660 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Foxj1Q61660 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Foxj1Q61660 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Foxj1Q61660 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.06■□□□□ 0.8
Foxj1Q61660 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.06■□□□□ 0.8
Foxj1Q61660 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Foxj1Q61660 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Foxj1Q61660 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Foxj1Q61660 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Foxj1Q61660 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxj1Q61660 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Foxj1Q61660 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxj1Q61660 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.05■□□□□ 0.8
Foxj1Q61660 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxj1Q61660 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxj1Q61660 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxj1Q61660 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxj1Q61660 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Foxj1Q61660 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Foxj1Q61660 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Foxj1Q61660 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Foxj1Q61660 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Foxj1Q61660 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Foxj1Q61660 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Foxj1Q61660 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.03■□□□□ 0.8
Foxj1Q61660 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Foxj1Q61660 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Foxj1Q61660 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Foxj1Q61660 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Foxj1Q61660 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Foxj1Q61660 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Foxj1Q61660 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.03■□□□□ 0.8
Foxj1Q61660 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Foxj1Q61660 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Foxj1Q61660 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Foxj1Q61660 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Foxj1Q61660 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.03■□□□□ 0.8
Foxj1Q61660 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Foxj1Q61660 Gm11421-201ENSMUST00000122124 294 ntBASIC20.02■□□□□ 0.8
Foxj1Q61660 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.02■□□□□ 0.8
Foxj1Q61660 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Foxj1Q61660 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Foxj1Q61660 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Foxj1Q61660 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Foxj1Q61660 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Foxj1Q61660 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Foxj1Q61660 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Foxj1Q61660 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Foxj1Q61660 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.01■□□□□ 0.79
Foxj1Q61660 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxj1Q61660 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxj1Q61660 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Foxj1Q61660 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.01■□□□□ 0.79
Foxj1Q61660 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.01■□□□□ 0.79
Foxj1Q61660 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxj1Q61660 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxj1Q61660 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxj1Q61660 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Foxj1Q61660 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Foxj1Q61660 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxj1Q61660 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Foxj1Q61660 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20■□□□□ 0.79
Foxj1Q61660 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Foxj1Q61660 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20■□□□□ 0.79
Foxj1Q61660 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20■□□□□ 0.79
Foxj1Q61660 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20■□□□□ 0.79
Foxj1Q61660 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Foxj1Q61660 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Foxj1Q61660 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20■□□□□ 0.79
Foxj1Q61660 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20■□□□□ 0.79
Foxj1Q61660 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Foxj1Q61660 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Foxj1Q61660 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Foxj1Q61660 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Foxj1Q61660 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxj1Q61660 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxj1Q61660 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxj1Q61660 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.99■□□□□ 0.79
Foxj1Q61660 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Foxj1Q61660 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.99■□□□□ 0.79
Foxj1Q61660 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Foxj1Q61660 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Foxj1Q61660 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
Foxj1Q61660 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxj1Q61660 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxj1Q61660 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxj1Q61660 Gm12933-201ENSMUST00000120203 872 ntBASIC19.98■□□□□ 0.79
Foxj1Q61660 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.98■□□□□ 0.79
Foxj1Q61660 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxj1Q61660 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.98■□□□□ 0.79
Foxj1Q61660 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxj1Q61660 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.98■□□□□ 0.79
Foxj1Q61660 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Foxj1Q61660 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxj1Q61660 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxj1Q61660 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms