Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Six4Q61321 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20■□□□□ 0.79
Six4Q61321 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Six4Q61321 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Six4Q61321 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Six4Q61321 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Six4Q61321 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six4Q61321 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Six4Q61321 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Six4Q61321 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Six4Q61321 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six4Q61321 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Six4Q61321 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six4Q61321 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.99■□□□□ 0.79
Six4Q61321 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six4Q61321 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six4Q61321 Gm43173-201ENSMUST00000202246 593 ntBASIC19.99■□□□□ 0.79
Six4Q61321 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six4Q61321 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six4Q61321 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Six4Q61321 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.99■□□□□ 0.79
Six4Q61321 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
Six4Q61321 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six4Q61321 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Six4Q61321 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six4Q61321 Gm8493-201ENSMUST00000196881 489 ntBASIC19.98■□□□□ 0.79
Six4Q61321 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.98■□□□□ 0.79
Six4Q61321 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six4Q61321 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Six4Q61321 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.97■□□□□ 0.79
Six4Q61321 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six4Q61321 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Six4Q61321 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six4Q61321 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Six4Q61321 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six4Q61321 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Six4Q61321 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six4Q61321 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six4Q61321 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Six4Q61321 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six4Q61321 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six4Q61321 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six4Q61321 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six4Q61321 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six4Q61321 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Six4Q61321 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.96■□□□□ 0.79
Six4Q61321 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.96■□□□□ 0.79
Six4Q61321 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Six4Q61321 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Six4Q61321 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Six4Q61321 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six4Q61321 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six4Q61321 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
Six4Q61321 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Six4Q61321 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.95■□□□□ 0.78
Six4Q61321 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six4Q61321 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six4Q61321 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.95■□□□□ 0.78
Six4Q61321 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.95■□□□□ 0.78
Six4Q61321 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six4Q61321 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six4Q61321 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six4Q61321 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.95■□□□□ 0.78
Six4Q61321 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six4Q61321 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six4Q61321 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Six4Q61321 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Six4Q61321 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Six4Q61321 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six4Q61321 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Six4Q61321 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six4Q61321 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Six4Q61321 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six4Q61321 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six4Q61321 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six4Q61321 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six4Q61321 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Six4Q61321 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Six4Q61321 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Six4Q61321 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Six4Q61321 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six4Q61321 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six4Q61321 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six4Q61321 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six4Q61321 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
Six4Q61321 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.92■□□□□ 0.78
Six4Q61321 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six4Q61321 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.92■□□□□ 0.78
Six4Q61321 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.92■□□□□ 0.78
Six4Q61321 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six4Q61321 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six4Q61321 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six4Q61321 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.92■□□□□ 0.78
Six4Q61321 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six4Q61321 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Six4Q61321 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Six4Q61321 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Six4Q61321 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Six4Q61321 Gm43017-201ENSMUST00000198296 752 ntBASIC19.91■□□□□ 0.78
Six4Q61321 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms