Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 AV356131-201ENSMUST00000206201 750 ntBASIC22.87■■□□□ 1.25
Scnn1aQ61180 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Scnn1aQ61180 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Scnn1aQ61180 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Scnn1aQ61180 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Scnn1aQ61180 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Scnn1aQ61180 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Scnn1aQ61180 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Scnn1aQ61180 AC152827.1-201ENSMUST00000221143 2189 ntBASIC22.86■■□□□ 1.25
Scnn1aQ61180 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Scnn1aQ61180 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.86■■□□□ 1.25
Scnn1aQ61180 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.86■■□□□ 1.25
Scnn1aQ61180 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.86■■□□□ 1.25
Scnn1aQ61180 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC22.86■■□□□ 1.25
Scnn1aQ61180 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Scnn1aQ61180 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Scnn1aQ61180 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Scnn1aQ61180 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC22.86■■□□□ 1.25
Scnn1aQ61180 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Scnn1aQ61180 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
Scnn1aQ61180 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Scnn1aQ61180 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Scnn1aQ61180 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Scnn1aQ61180 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Scnn1aQ61180 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC22.85■■□□□ 1.25
Scnn1aQ61180 Gm9988-201ENSMUST00000069786 435 ntBASIC22.85■■□□□ 1.25
Scnn1aQ61180 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Scnn1aQ61180 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Scnn1aQ61180 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Scnn1aQ61180 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.84■■□□□ 1.25
Scnn1aQ61180 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Scnn1aQ61180 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.84■■□□□ 1.25
Scnn1aQ61180 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC22.84■■□□□ 1.25
Scnn1aQ61180 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC22.84■■□□□ 1.25
Scnn1aQ61180 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Scnn1aQ61180 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
Scnn1aQ61180 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Scnn1aQ61180 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Scnn1aQ61180 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Scnn1aQ61180 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Scnn1aQ61180 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Scnn1aQ61180 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Scnn1aQ61180 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Scnn1aQ61180 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
Scnn1aQ61180 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
Scnn1aQ61180 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
Scnn1aQ61180 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Scnn1aQ61180 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Scnn1aQ61180 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Scnn1aQ61180 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Scnn1aQ61180 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Scnn1aQ61180 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Scnn1aQ61180 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Scnn1aQ61180 Cdkn3-203ENSMUST00000227149 1952 ntBASIC22.81■■□□□ 1.24
Scnn1aQ61180 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Scnn1aQ61180 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Scnn1aQ61180 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
Scnn1aQ61180 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Scnn1aQ61180 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC22.81■■□□□ 1.24
Scnn1aQ61180 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Scnn1aQ61180 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Scnn1aQ61180 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.81■■□□□ 1.24
Scnn1aQ61180 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Scnn1aQ61180 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Scnn1aQ61180 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Scnn1aQ61180 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Scnn1aQ61180 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC22.8■■□□□ 1.24
Scnn1aQ61180 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Scnn1aQ61180 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22.8■■□□□ 1.24
Scnn1aQ61180 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Scnn1aQ61180 Reep4-203ENSMUST00000226563 1444 ntBASIC22.8■■□□□ 1.24
Scnn1aQ61180 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.8■■□□□ 1.24
Scnn1aQ61180 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Scnn1aQ61180 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Scnn1aQ61180 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Scnn1aQ61180 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Scnn1aQ61180 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Scnn1aQ61180 AA386476-201ENSMUST00000098781 1665 ntBASIC22.79■■□□□ 1.24
Scnn1aQ61180 Gm13234-201ENSMUST00000120010 747 ntBASIC22.79■■□□□ 1.24
Scnn1aQ61180 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC22.79■■□□□ 1.24
Scnn1aQ61180 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.79■■□□□ 1.24
Scnn1aQ61180 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Scnn1aQ61180 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Scnn1aQ61180 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
Scnn1aQ61180 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Scnn1aQ61180 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Scnn1aQ61180 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Scnn1aQ61180 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Scnn1aQ61180 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Scnn1aQ61180 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
Scnn1aQ61180 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Scnn1aQ61180 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Scnn1aQ61180 Gm37179-201ENSMUST00000194862 823 ntBASIC22.78■■□□□ 1.24
Scnn1aQ61180 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC22.78■■□□□ 1.24
Scnn1aQ61180 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Scnn1aQ61180 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Scnn1aQ61180 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Scnn1aQ61180 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Scnn1aQ61180 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Scnn1aQ61180 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms