Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vps54Q5SPW0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vps54Q5SPW0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
Vps54Q5SPW0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vps54Q5SPW0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vps54Q5SPW0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.81■■□□□ 1.4
Vps54Q5SPW0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vps54Q5SPW0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vps54Q5SPW0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vps54Q5SPW0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Vps54Q5SPW0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Vps54Q5SPW0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Vps54Q5SPW0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Vps54Q5SPW0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Vps54Q5SPW0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vps54Q5SPW0 Gm43909-201ENSMUST00000203443 1876 ntBASIC23.79■■□□□ 1.4
Vps54Q5SPW0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vps54Q5SPW0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC23.79■■□□□ 1.4
Vps54Q5SPW0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vps54Q5SPW0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC23.79■■□□□ 1.4
Vps54Q5SPW0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Vps54Q5SPW0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC23.79■■□□□ 1.4
Vps54Q5SPW0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Vps54Q5SPW0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Vps54Q5SPW0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vps54Q5SPW0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vps54Q5SPW0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Vps54Q5SPW0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vps54Q5SPW0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
Vps54Q5SPW0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vps54Q5SPW0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Vps54Q5SPW0 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.78■■□□□ 1.4
Vps54Q5SPW0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vps54Q5SPW0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Vps54Q5SPW0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Vps54Q5SPW0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
Vps54Q5SPW0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Vps54Q5SPW0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC23.77■■□□□ 1.4
Vps54Q5SPW0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Vps54Q5SPW0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vps54Q5SPW0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Vps54Q5SPW0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vps54Q5SPW0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vps54Q5SPW0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Vps54Q5SPW0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Vps54Q5SPW0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.76■■□□□ 1.39
Vps54Q5SPW0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vps54Q5SPW0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vps54Q5SPW0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC23.75■■□□□ 1.39
Vps54Q5SPW0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Vps54Q5SPW0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Vps54Q5SPW0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vps54Q5SPW0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vps54Q5SPW0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Vps54Q5SPW0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Vps54Q5SPW0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Vps54Q5SPW0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Vps54Q5SPW0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Vps54Q5SPW0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Vps54Q5SPW0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Vps54Q5SPW0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Vps54Q5SPW0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Vps54Q5SPW0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Vps54Q5SPW0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Vps54Q5SPW0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Vps54Q5SPW0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Vps54Q5SPW0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC23.72■■□□□ 1.39
Vps54Q5SPW0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Vps54Q5SPW0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Vps54Q5SPW0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Vps54Q5SPW0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC23.72■■□□□ 1.39
Vps54Q5SPW0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Vps54Q5SPW0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Vps54Q5SPW0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Vps54Q5SPW0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vps54Q5SPW0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vps54Q5SPW0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vps54Q5SPW0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vps54Q5SPW0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Vps54Q5SPW0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vps54Q5SPW0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Vps54Q5SPW0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vps54Q5SPW0 Gm43060-201ENSMUST00000200621 289 ntBASIC23.71■■□□□ 1.39
Vps54Q5SPW0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vps54Q5SPW0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vps54Q5SPW0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Vps54Q5SPW0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Vps54Q5SPW0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Vps54Q5SPW0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC23.7■■□□□ 1.38
Vps54Q5SPW0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Vps54Q5SPW0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Vps54Q5SPW0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Vps54Q5SPW0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC23.69■■□□□ 1.38
Vps54Q5SPW0 Gm11421-201ENSMUST00000122124 294 ntBASIC23.69■■□□□ 1.38
Vps54Q5SPW0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Vps54Q5SPW0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Vps54Q5SPW0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
Vps54Q5SPW0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Vps54Q5SPW0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC23.68■■□□□ 1.38
Vps54Q5SPW0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms